LOCUS AEE85130.1 119 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 60S acidic ribosomal protein family protein.
ACCESSION CP002687-4663
PROTEIN_ID AEE85130.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G25890"
/gene_synonym="F14M19.170"
/gene_synonym="F14M19_170"
/inference="Similar to RNA sequence,
EST:INSD:BP826777.1,INSD:DR308403.1,INSD:DR209245.1,
INSD:ES093385.1,INSD:ES115257.1,INSD:DR308391.1,
INSD:DR308408.1,INSD:DR308398.1,INSD:DR308444.1,
INSD:EL269091.1,INSD:DR209249.1,INSD:EL324766.1,
INSD:DR308423.1,INSD:EL250823.1,INSD:DR308407.1,
INSD:BP659873.1,INSD:DR308400.1,INSD:ES066199.1,
INSD:BP836956.2,INSD:DR308438.1,INSD:EH957577.1,
INSD:EH880789.1,INSD:DR308389.1,INSD:DR308402.1,
INSD:EL195877.1,INSD:DR308399.1,INSD:DR187628.1,
INSD:DR308404.1,INSD:ES125642.1,INSD:DR376985.1,
INSD:ES020621.1,INSD:EL104170.1,INSD:DR308443.1,
INSD:EL205768.1,INSD:DR308382.1,INSD:DR308442.1,
INSD:BP643755.1,INSD:DR308430.1,INSD:ES085842.1,
INSD:EL336326.1,INSD:DR308383.1,INSD:BP812551.1,
INSD:EL182596.1,INSD:DR308388.1,INSD:DR308422.1,
INSD:EH881563.1,INSD:DR308413.1,INSD:DR308432.1,
INSD:EL043213.1,INSD:DR308431.1,INSD:ES044704.1,
INSD:ES137759.1,INSD:DR308420.1,INSD:EL157189.1,
INSD:EL221494.1,INSD:DR308394.1,INSD:DR308405.1,
INSD:BP854515.1,INSD:DR187627.1,INSD:BP640401.1,
INSD:DR308395.1,INSD:DR371128.1,INSD:DR187630.1,
INSD:DR308384.1,INSD:DR308441.1,INSD:DR308433.1,
INSD:DR308439.1,INSD:AV556500.1,INSD:DR308414.1,
INSD:DR308415.1,INSD:EL979011.1,INSD:ES148747.1,
INSD:EL241257.1,INSD:DR308426.1,INSD:EL244236.1,
INSD:DR308428.1,INSD:DR308419.1,INSD:DR308416.1,
INSD:DR308385.1,INSD:ES209886.1,INSD:DR308436.1,
INSD:ES104339.1,INSD:DR308397.1,INSD:DR308390.1,
INSD:DR308429.1,INSD:DR308427.1,INSD:DR308440.1,
INSD:DR187629.1,INSD:DR308396.1,INSD:BP841168.1,
INSD:DR308434.1,INSD:DR308435.1,INSD:DR374873.1,
INSD:ES022630.1,INSD:DR308418.1,INSD:DR308425.1,
INSD:DR308421.1,INSD:ES143286.1,INSD:BP837723.1,
INSD:EL219140.1,INSD:DR308381.1,INSD:AV789105.1,
INSD:EL339922.1,INSD:ES141112.1,INSD:DR308393.1,
INSD:DR187626.1,INSD:DR308392.1,INSD:DR308417.1,
INSD:EL212257.1,INSD:DR308410.1,INSD:BP630746.1,
INSD:BP626051.1,INSD:DR308386.1,INSD:DR377161.1,
INSD:BP659773.1,INSD:DR308424.1,INSD:EL220509.1,
INSD:ES191080.1,INSD:ES022801.1,INSD:DR381974.1,
INSD:ES155188.1,INSD:ES082615.1,INSD:CK120172.1,
INSD:BP837178.1,INSD:DR308387.1,INSD:DR308409.1,
INSD:DR308406.1,INSD:DR378023.1,INSD:BP633116.1,
INSD:ES175738.1,INSD:BP653800.1,INSD:DR308401.1,
INSD:DR308437.1,INSD:BP625258.1,INSD:ES066455.1,
INSD:EH846303.1,INSD:DR187625.1,INSD:DR308412.1,
INSD:DR308411.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY070030.1,INSD:AY091219.1"
/note="60S acidic ribosomal protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translational elongation; LOCATED IN: cytosolic ribosome,
ribosome, nucleus, plasma membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosomal protein 60S
(InterPro:IPR001813); BEST Arabidopsis thaliana protein
match is: 60S acidic ribosomal protein family
(TAIR:AT5G57290.3); Has 643 Blast hits to 642 proteins in
155 species: Archae - 0; Bacteria - 8; Metazoa - 276;
Fungi - 74; Plants - 217; Viruses - 0; Other Eukaryotes -
68 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25890"
/db_xref="Araport:AT4G25890"
intron_pos 67:0 (1/1)
BEGIN
1 MGVFTFVCKN GGGAWSAKQH EGELESSASS TYELQRKLVQ VSLSADSSGG VQSSFSLVSP
61 TSAVFQVIVG GGGGGGFSAG GAASSGGGAG EAAAAPKEDE KKKEESEEEE GDFGFDLFG
//