LOCUS AEE85117.1 286 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana xyloglucan endotransglycosylase 6 protein.
ACCESSION CP002687-4646
PROTEIN_ID AEE85117.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="XTR6"
/locus_tag="AT4G25810"
/gene_synonym="F14M19.90"
/gene_synonym="F14M19_90"
/gene_synonym="XTH23"
/gene_synonym="xyloglucan endotransglucosylase/hydrolase
23"
/gene_synonym="xyloglucan endotransglycosylase 6"
/inference="Similar to RNA sequence,
EST:INSD:AV554665.1,INSD:BP855982.1,INSD:AV825646.1,
INSD:EL286339.1,INSD:CB253381.1,INSD:BP851177.1,
INSD:CB254942.1,INSD:CB255401.1,INSD:AV791836.1,
INSD:EL108006.1,INSD:CB253619.1,INSD:BP579270.1,
INSD:EL111016.1,INSD:BP580262.1,INSD:CB252959.1,
INSD:BE530652.1,INSD:CB253587.1,INSD:CB252195.1,
INSD:CB254884.1,INSD:BP854374.1,INSD:EL200401.1,
INSD:AV545753.1,INSD:AV552644.1,INSD:AV537154.1,
INSD:AV537170.1,INSD:EL059890.1,INSD:CB255202.1,
INSD:AI996718.1,INSD:BP861022.1,INSD:CB252657.1,
INSD:EH826179.1,INSD:CB252139.1,INSD:BP846660.1,
INSD:CB255403.1,INSD:EL321222.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY093252.1,INSD:AY062472.1,INSD:U43488.1"
/note="xyloglucan endotransglycosylase 6 (XTR6); FUNCTIONS
IN: hydrolase activity, acting on glycosyl bonds,
xyloglucan:xyloglucosyl transferase activity, hydrolase
activity, hydrolyzing O-glycosyl compounds; INVOLVED IN:
carbohydrate metabolic process, cellular glucan metabolic
process; LOCATED IN: cell wall; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Xyloglucan
endotransglucosylase/hydrolase (InterPro:IPR016455),
Xyloglucan endo-transglycosylase, C-terminal
(InterPro:IPR010713), Concanavalin A-like
lectin/glucanase, subgroup (InterPro:IPR013320),
Concanavalin A-like lectin/glucanase (InterPro:IPR008985),
Glycoside hydrolase, family 16 (InterPro:IPR000757),
Glycoside hydrolase, family 16, active site
(InterPro:IPR008263); BEST Arabidopsis thaliana protein
match is: Xyloglucan endotransglucosylase/hydrolase family
protein (TAIR:AT5G57560.1); Has 2255 Blast hits to 2235
proteins in 316 species: Archae - 0; Bacteria - 302;
Metazoa - 0; Fungi - 455; Plants - 1384; Viruses - 0;
Other Eukaryotes - 114 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25810"
/db_xref="Araport:AT4G25810"
intron_pos 91:0 (1/2)
intron_pos 155:2 (2/2)
BEGIN
1 MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF
61 QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE IDFEFLGNLS GDPYTLHTNV
121 FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ
181 PMRMYSSLWN AEEWATRGGL VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST
241 GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
//