LOCUS AEE85107.1 177 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA binding Plectin/S10 domain-containing
protein protein.
ACCESSION CP002687-4637
PROTEIN_ID AEE85107.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G25740"
/gene_synonym="F14M19.20"
/gene_synonym="F14M19_20"
/inference="Similar to RNA sequence,
EST:INSD:ES167667.1,INSD:DR349744.1,INSD:BP651103.1,
INSD:DR349659.1,INSD:DR349677.1,INSD:EL213709.1,
INSD:EG510558.1,INSD:DR378126.1,INSD:DR349701.1,
INSD:EL045415.1,INSD:DR349693.1,INSD:DR349737.1,
INSD:DR349709.1,INSD:BP578597.1,INSD:DR349673.1,
INSD:DR349720.1,INSD:DR349742.1,INSD:DR349702.1,
INSD:EH970658.1,INSD:EL994105.1,INSD:DR349666.1,
INSD:DR349651.1,INSD:DR349743.1,INSD:BP833684.1,
INSD:DR349672.1,INSD:DR349683.1,INSD:DR349748.1,
INSD:EH917072.1,INSD:BP658137.1,INSD:BP839709.1,
INSD:EL150872.1,INSD:BP661749.1,INSD:BP822332.1,
INSD:DR349715.1,INSD:R29787.1,INSD:EL190643.1,
INSD:BP840895.1,INSD:DR349670.1,INSD:BP863154.2,
INSD:DR349705.1,INSD:EL978388.1,INSD:EL312419.1,
INSD:EL256347.1,INSD:ES042710.1,INSD:BP659324.1,
INSD:DR349723.1,INSD:DR349657.1,INSD:DR349699.1,
INSD:AV805190.1,INSD:BP846298.2,INSD:EG510556.1,
INSD:CK118486.1,INSD:EL003886.1,INSD:DR349710.1,
INSD:DR349681.1,INSD:BP818939.2,INSD:DR349734.1,
INSD:DR349661.1,INSD:DR349685.1,INSD:DR349716.1,
INSD:DR349719.1,INSD:EH823458.1,INSD:ES195342.1,
INSD:DR349689.1,INSD:BP806640.2,INSD:BP657429.1,
INSD:DR349684.1,INSD:DR349690.1,INSD:BP814625.1,
INSD:EH909383.1,INSD:DR349718.1,INSD:DR349679.1,
INSD:DR349655.1,INSD:DR349751.1,INSD:ES104829.1,
INSD:DR349704.1,INSD:DR349713.1,INSD:BP820861.1,
INSD:BP841425.1,INSD:AV532285.1,INSD:BP829720.1,
INSD:BP662234.1,INSD:BP652273.1,INSD:DR349749.1,
INSD:DR349674.1,INSD:BP857603.1,INSD:EH839655.1,
INSD:BP644214.1,INSD:BP612630.1,INSD:BP565245.1,
INSD:EL113745.1,INSD:DR349703.1,INSD:BP590410.1,
INSD:BP655378.1,INSD:BP814708.1,INSD:ES005021.1,
INSD:DR349692.1,INSD:BP823622.1,INSD:DR349665.1,
INSD:BE520855.1,INSD:DR349726.1,INSD:BP652180.1,
INSD:DR349695.1,INSD:ES188424.1,INSD:EL979878.1,
INSD:DR349697.1,INSD:BP855490.1,INSD:ES050143.1,
INSD:EL227880.1,INSD:EL273008.1,INSD:BP591793.1,
INSD:DR349750.1,INSD:AI997138.1,INSD:DR349739.1,
INSD:ES046615.1,INSD:DR349733.1,INSD:DR349727.1,
INSD:EL013503.1,INSD:DR349708.1,INSD:EH855055.1,
INSD:BP641150.1,INSD:EL284229.1,INSD:EL207607.1,
INSD:BP651609.1,INSD:AV821470.1,INSD:DR349721.1,
INSD:CF652866.1,INSD:DR349662.1,INSD:DR349671.1,
INSD:BP832657.1,INSD:DR349700.1,INSD:DR349676.1,
INSD:DR349732.1,INSD:ES138495.1,INSD:BP624325.1,
INSD:EL207765.1,INSD:BP807528.1,INSD:ES088209.1,
INSD:EL074066.1,INSD:Z29734.1,INSD:EL184740.1,
INSD:BP658528.1,INSD:DR349688.1,INSD:CK121193.1,
INSD:AV552042.1,INSD:BP644612.1,INSD:BE520856.1,
INSD:DR349682.1,INSD:DR349741.1,INSD:ES018500.1,
INSD:DR377322.1,INSD:EL274815.1,INSD:DR349687.1,
INSD:ES013211.1,INSD:BP801571.1,INSD:BP852254.1,
INSD:ES128385.1,INSD:DR349728.1,INSD:EL119283.1,
INSD:BP858583.1,INSD:EL314730.1,INSD:DR349664.1,
INSD:ES114947.1,INSD:DR349656.1,INSD:BP836113.1,
INSD:CK118469.1,INSD:BP656963.1,INSD:DR349696.1,
INSD:DR349652.1,INSD:EL237423.1,INSD:BP671443.1,
INSD:EG510555.1,INSD:DR349706.1,INSD:ES194487.1,
INSD:BP828471.1,INSD:DR349649.1,INSD:DR349712.1,
INSD:ES043743.1,INSD:EH892883.1,INSD:DR349740.1,
INSD:BP858062.1,INSD:DR349736.1,INSD:EH901652.1,
INSD:DR349714.1,INSD:DR349653.1,INSD:DR349658.1,
INSD:DR349668.1,INSD:BP584040.1,INSD:EL088329.1,
INSD:BP856574.1,INSD:DR349707.1,INSD:BP842346.1,
INSD:AV819191.1,INSD:BP634691.1,INSD:BP642667.1,
INSD:EG521744.1,INSD:DR349675.1,INSD:DR349730.1,
INSD:CF652711.1,INSD:BP654486.1,INSD:BP623363.1,
INSD:BP826987.1,INSD:DR349747.1,INSD:DR349680.1,
INSD:BP660168.1,INSD:CB253490.1,INSD:DR349738.1,
INSD:DR349669.1,INSD:DR349678.1,INSD:DR349650.1,
INSD:BP833134.2,INSD:Z29733.1,INSD:BP644371.1,
INSD:EL111945.1,INSD:BP592931.1,INSD:ES162034.1,
INSD:EG510557.1,INSD:DR349722.1,INSD:DR371678.1,
INSD:DR349717.1,INSD:ES074036.1,INSD:BP832514.1,
INSD:DR349735.1,INSD:EG521741.1,INSD:DR349711.1,
INSD:DR349686.1,INSD:AV531969.1,INSD:EL996576.1,
INSD:BP622652.1,INSD:DR349729.1,INSD:BP595477.1,
INSD:DR349654.1,INSD:ES047607.1,INSD:EL981740.1,
INSD:CF652276.1,INSD:DR349694.1,INSD:DR349724.1,
INSD:DR349660.1,INSD:AV542790.1,INSD:DR349725.1,
INSD:T42647.1,INSD:BP854817.1,INSD:EG496022.1,
INSD:DR349667.1,INSD:DR349691.1,INSD:DR349745.1,
INSD:EH829933.1,INSD:DR349698.1,INSD:CK118190.1,
INSD:EL970041.1,INSD:ES113415.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY035172.1"
/note="RNA binding Plectin/S10 domain-containing protein;
FUNCTIONS IN: structural constituent of ribosome; INVOLVED
IN: translation; LOCATED IN: cytosolic small ribosomal
subunit, cytosolic ribosome, membrane; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Plectin/S10, N-terminal
(InterPro:IPR005326); BEST Arabidopsis thaliana protein
match is: RNA binding Plectin/S10 domain-containing
protein (TAIR:AT5G52650.1); Has 2455 Blast hits to 1939
proteins in 382 species: Archae - 0; Bacteria - 320;
Metazoa - 798; Fungi - 208; Plants - 219; Viruses - 1;
Other Eukaryotes - 909 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25740"
/db_xref="Araport:AT4G25740"
intron_pos 2:0 (1/4)
intron_pos 18:1 (2/4)
intron_pos 111:2 (3/4)
intron_pos 152:0 (4/4)
BEGIN
1 MIISENNRRE ICKYLFKEGV CFAKKDFNLP KHPLIDVPNL QVIKLMQSFK SKEYVRETFA
61 WMHYYWFLTN EGIEFLRTYL NLPSDVVPAT LKKSAKPGGR PFGGPPGDRQ RGPPRSDGDR
121 PRFGDRDGYR GGPRGGDEKG GAPADFQPSF QGGGGRPGFG RGAGGYSAAA PSGSGFP
//