LOCUS AEE85075.1 1081 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homolog of DNA mismatch repair protein
MSH3 protein.
ACCESSION CP002687-4593
PROTEIN_ID AEE85075.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="MSH3"
/locus_tag="AT4G25540"
/gene_synonym="ATMSH3"
/gene_synonym="homolog of DNA mismatch repair protein
MSH3"
/gene_synonym="M7J2.90"
/gene_synonym="M7J2_90"
/inference="Similar to RNA sequence,
EST:INSD:BP823572.1,INSD:BP643959.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ007791.1,INSD:AK222004.1"
/note="homolog of DNA mismatch repair protein MSH3 (MSH3);
CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein
MutS, clamp (InterPro:IPR007861), DNA mismatch repair
protein MutS, connector (InterPro:IPR007860), DNA mismatch
repair protein MutS, N-terminal (InterPro:IPR016151), DNA
mismatch repair protein MutS, core (InterPro:IPR007696),
DNA mismatch repair protein MutS, C-terminal
(InterPro:IPR000432), DNA mismatch repair protein
MutS-like, N-terminal (InterPro:IPR007695); BEST
Arabidopsis thaliana protein match is: MUTS homolog 6
(TAIR:AT4G02070.2); Has 14547 Blast hits to 13713 proteins
in 2703 species: Archae - 153; Bacteria - 9793; Metazoa -
705; Fungi - 864; Plants - 451; Viruses - 3; Other
Eukaryotes - 2578 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25540"
/db_xref="Araport:AT4G25540"
intron_pos 313:0 (1/11)
intron_pos 377:0 (2/11)
intron_pos 432:0 (3/11)
intron_pos 465:0 (4/11)
intron_pos 549:0 (5/11)
intron_pos 634:0 (6/11)
intron_pos 678:0 (7/11)
intron_pos 765:0 (8/11)
intron_pos 789:0 (9/11)
intron_pos 839:0 (10/11)
intron_pos 993:0 (11/11)
BEGIN
1 MGKQKQQTIS RFFAPKPKSP THEPNPVAES STPPPKISAT VSFSPSKRKL LSDHLAAASP
61 KKPKLSPHTQ NPVPDPNLHQ RFLQRFLEPS PEEYVPETSS SRKYTPLEQQ VVELKSKYPD
121 VVLMVEVGYR YRFFGEDAEI AARVLGIYAH MDHNFMTASV PTFRLNFHVR RLVNAGYKIG
181 VVKQTETAAI KSHGANRTGP FFRGLSALYT KATLEAAEDI SGGCGGEEGF GSQSNFLVCV
241 VDERVKSETL GCGIEMSFDV RVGVVGVEIS TGEVVYEEFN DNFMRSGLEA VILSLSPAEL
301 LLGQPLSQQT EKFLVAHAGP TSNVRVERAS LDCFSNGNAV DEVISLCEKI SAGNLEDDKE
361 MKLEAAEKGM SCLTVHTIMN MPHLTVQALA LTFCHLKQFG FERILYQGAS FRSLSSNTEM
421 TLSANTLQQL EVVKNNSDGS ESGSLFHNMN HTLTVYGSRL LRHWVTHPLC DRNLISARLD
481 AVSEISACMG SHSSSQLSSE LVEEGSERAI VSPEFYLVLS SVLTAMSRSS DIQRGITRIF
541 HRTAKATEFI AVMEAILLAG KQIQRLGIKQ DSEMRSMQSA TVRSTLLRKL ISVISSPVVV
601 DNAGKLLSAL NKEAAVRGDL LDILITSSDQ FPELAEARQA VLVIREKLDS SIASFRKKLA
661 IRNLEFLQVS GITHLIELPV DSKVPMNWVK VNSTKKTIRY HPPEIVAGLD ELALATEHLA
721 IVNRASWDSF LKSFSRYYTD FKAAVQALAA LDCLHSLSTL SRNKNYVRPE FVDDCEPVEI
781 NIQSGRHPVL ETILQDNFVP NDTILHAEGE YCQIITGPNM GGKSCYIRQV ALISIMAQVG
841 SFVPASFAKL HVLDGVFTRM GASDSIQHGR STFLEELSEA SHIIRTCSSR SLVILDELGR
901 GTSTHDGVAI AYATLQHLLA EKRCLVLFVT HYPEIAEISN GFPGSVGTYH VSYLTLQKDK
961 GSYDHDDVTY LYKLVRGLCS RSFGFKVAQL AQIPPSCIRR AISMAAKLEA EVRARERNTR
1021 MGEPEGHEEP RGAEESISAL GDLFADLKFA LSEEDPWKAF EFLKHAWKIA GKIRLKPTCS
1081 F
//