LOCUS AEE85060.1 430 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger WD40 repeat protein 1 protein.
ACCESSION CP002687-4573
PROTEIN_ID AEE85060.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ZFWD1"
/locus_tag="AT4G25440"
/gene_synonym="T30C3.6"
/gene_synonym="zinc finger WD40 repeat protein 1"
/inference="Similar to RNA sequence,
EST:INSD:EL084481.1,INSD:DR369111.1,INSD:EL986582.1,
INSD:ES112964.1,INSD:ES163687.1,INSD:EH988482.1,
INSD:ES184156.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT026122.1,INSD:AJ252063.1,INSD:BX828187.1,
INSD:BX827814.1"
/note="zinc finger WD40 repeat protein 1 (ZFWD1);
FUNCTIONS IN: zinc ion binding, nucleic acid binding;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: xylem; CONTAINS
InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782),
Zinc finger, CCCH-type (InterPro:IPR000571), WD40 repeat,
conserved site (InterPro:IPR019775), WD40 repeat
(InterPro:IPR001680), G-protein beta WD-40 repeat, region
(InterPro:IPR020472), WD40 repeat-like-containing domain
(InterPro:IPR011046), WD40-repeat-containing domain
(InterPro:IPR017986), WD40/YVTN repeat-like-containing
domain (InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT5G51980.1); Has 28356 Blast hits to 16036 proteins
in 564 species: Archae - 44; Bacteria - 4332; Metazoa -
10522; Fungi - 6455; Plants - 3358; Viruses - 0; Other
Eukaryotes - 3645 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25440"
/db_xref="Araport:AT4G25440"
intron_pos 146:0 (1/8)
intron_pos 178:0 (2/8)
intron_pos 208:0 (3/8)
intron_pos 242:0 (4/8)
intron_pos 291:0 (5/8)
intron_pos 331:0 (6/8)
intron_pos 351:0 (7/8)
intron_pos 383:2 (8/8)
BEGIN
1 MDLDMNGGNK RVFQRLGGGS NRPTTDSNQK VCFHWRAGRC NRYPCPYLHR ELPGPGSGPV
61 AASSNKRVAD ESGFAGPSHR RGPGFSGTAN NWGRFGGNRT VTKTEKLCKF WVDGNCPYGD
121 KCRYLHCWSK GDSFSLLTQL DGHQKVVTGI ALPSGSDKLY TASKDETVRI WDCASGQCTG
181 VLNLGGEVGC IISEGPWLLV GMPNLVKAWN IQNNADLSLN GPVGQVYSLV VGTDLLFAGT
241 QDGSILVWRY NSTTSCFDPA ASLLGHTLAV VSLYVGANRL YSGAMDNSIK VWSLDNLQCI
301 QTLTEHTSVV MSLICWDQFL LSCSLDNTVK IWAATEGGNL EVTYTHKEEY GVLALCGVHD
361 AEAKPVLLCS CNDNSLHLYD LPSFTERGKI LAKQEIRSIQ IGPGGIFFTG DGSGQVKVWK
421 WSTESTPILS
//