LOCUS AEE85035.1 692 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA photolyase protein.
ACCESSION CP002687-4532
PROTEIN_ID AEE85035.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G25290"
/gene_synonym="F24A6.130"
/gene_synonym="F24A6_130"
/inference="Similar to RNA sequence,
EST:INSD:AV831565.1,INSD:EL253449.1,INSD:EL115961.1,
INSD:EH989844.1,INSD:EH930066.1,INSD:EL056968.1,
INSD:EH831126.1,INSD:EL988914.1,INSD:ES046353.1,
INSD:EL037298.1,INSD:ES018099.1,INSD:EL159477.1"
/note="DNA photolyases;DNA photolyases; FUNCTIONS IN: DNA
photolyase activity; INVOLVED IN: DNA repair; CONTAINS
InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich
fold (InterPro:IPR014729), DNA photolyase, N-terminal
(InterPro:IPR006050), Alpha/beta hydrolase fold-1
(InterPro:IPR000073); BEST Arabidopsis thaliana protein
match is: alpha/beta-Hydrolases superfamily protein
(TAIR:AT4G36530.1); Has 6717 Blast hits to 6715 proteins
in 1229 species: Archae - 120; Bacteria - 4210; Metazoa -
285; Fungi - 40; Plants - 525; Viruses - 0; Other
Eukaryotes - 1537 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25290"
/db_xref="Araport:AT4G25290"
intron_pos 75:1 (1/13)
intron_pos 120:0 (2/13)
intron_pos 170:0 (3/13)
intron_pos 207:1 (4/13)
intron_pos 307:2 (5/13)
intron_pos 379:0 (6/13)
intron_pos 409:0 (7/13)
intron_pos 494:1 (8/13)
intron_pos 532:0 (9/13)
intron_pos 565:0 (10/13)
intron_pos 581:0 (11/13)
intron_pos 618:0 (12/13)
intron_pos 648:1 (13/13)
BEGIN
1 MAFLALPHFL HLRLRRNDRK NRCKCCLSSA TNEGSTAVVW FKHDLRVDDH PGLLAASKHR
61 AVIPLYVLDR RILSRYTTDT LELAIIALED LRKTLKKQGS NLMLRYGNAE NVIEDLVKEV
121 RAPFVFVEEE VEYHLCEVLD AVKNKLEGVS LSGESPRIVA WRTPFYESQN LTDLPQSWEE
181 FKKLKLPLTL PVPAAKFSSP GSELQWGSVP TLDDLKDYLK ESLWEIENSW REMAQASAER
241 VLMERLGNLK ESSMEPIVDG SLGKKVDNSV FVTSKRDTVG GGNEVVLNAL AGYLRYLEGT
301 SRDDWQEVHA RLRDAETRPG ASFFKLFGPV LCLGIVSRRS VHYEAIEYEK ERNAGFISPF
361 GYSAATVSAA TDAVCSMEWY YLLALSRERI DEKRHAIRIW RWKGYLIQYT VVGNEGPAVL
421 LVHGFGAFLE HYRDNVDNIV NSKNRVWTIT VLGFGKSEKP NIIYTELLWA ELLRDFMAEV
481 VGEPAHCVGN SIGGYFVALM AFLWPALVKS VVLVNSAGNV VPGYSPLPIS RERRVPFGAQ
541 FGSRLLLFFL QLNVKKLLKD CYPVKPERAD DFLVTEMLRA SRDPGVVMVL ESIFGFDLSL
601 PLNYLLKGFE EKTLVIQGME DPISDPQKKV ALLKELCPAM VIKKVKAGHC PHDEISEEVN
661 PIICEWIVKV TNDDRELKAS SSQQLYHSNK QN
//