LOCUS AEE85021.1 311 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RNA polymerase III RPC4 protein.
ACCESSION CP002687-4514
PROTEIN_ID AEE85021.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G25180"
/gene_synonym="F24A6.20"
/gene_synonym="F24A6_20"
/inference="Similar to RNA sequence,
EST:INSD:EL181009.1,INSD:ES172476.1,INSD:BP654193.1,
INSD:EG523200.1,INSD:AV542739.1,INSD:Z33752.1,
INSD:EG466572.1,INSD:BP792403.1,INSD:EL111510.1,
INSD:DR376257.1,INSD:ES201631.1,INSD:EG466591.1,
INSD:AV538521.1,INSD:BP664730.1,INSD:AV784394.1,
INSD:EH940882.1,INSD:EG466581.1,INSD:BP780867.1,
INSD:EG523211.1,INSD:DR369527.1,INSD:BP614944.1,
INSD:ES147479.1,INSD:ES163129.1,INSD:EG466593.1,
INSD:EG466574.1,INSD:EH928719.1,INSD:AV813147.1,
INSD:EH922509.1,INSD:BP664270.1,INSD:EG466594.1,
INSD:EL294161.1,INSD:EH923863.1,INSD:AV782000.1,
INSD:AV531083.1,INSD:ES033797.1,INSD:EG466592.1,
INSD:CD530218.1,INSD:ES165160.1,INSD:ES178617.1,
INSD:EG490883.1,INSD:EG466590.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT014905.1,INSD:AK226744.1,INSD:BT015702.1"
/note="RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed
RNA polymerase activity, DNA binding; INVOLVED IN:
transcription from RNA polymerase III promoter; LOCATED
IN: DNA-directed RNA polymerase III complex; CONTAINS
InterPro DOMAIN/s: RNA polymerase III Rpc4
(InterPro:IPR007811); BEST Arabidopsis thaliana protein
match is: RNA polymerase III RPC4 (TAIR:AT5G09380.1); Has
141 Blast hits to 141 proteins in 63 species: Archae - 0;
Bacteria - 2; Metazoa - 43; Fungi - 19; Plants - 57;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25180"
/db_xref="Araport:AT4G25180"
intron_pos 10:0 (1/8)
intron_pos 31:2 (2/8)
intron_pos 53:0 (3/8)
intron_pos 61:1 (4/8)
intron_pos 134:0 (5/8)
intron_pos 155:1 (6/8)
intron_pos 187:0 (7/8)
intron_pos 259:0 (8/8)
BEGIN
1 MDSGEQKSKR RFQPNPPRPS RRLPIAPTSN TEAEEDEENI KASRQFDRRI VGRRPKTETK
61 ASSPEVAFQP SLSPLAIRSF GVPKEDDKPN SDVNPSSPAS ILPAVSSVTA AQEDGEEVHN
121 FVTRTGDDYV EPWDYRNSYY PTVLPLRKPN SGDIELLDQE EFGEVAKNRD YDENTINSAE
181 ELGLTSVQHS KKQMFIFKIP DCLPVVKQTT GATTKRSVRE YSSGISNPFE GLPEGFMGKM
241 LVYKSGAVKL KVGDALFDVS PGPGTKIPND VVAIDIKGRN CSRIGSSAKF VTVTPDVESL
301 LNPASDMETQ K
//