LOCUS AEE85010.1 186 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Fe superoxide dismutase 1 protein.
ACCESSION CP002687-4504
PROTEIN_ID AEE85010.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="FSD1"
/locus_tag="AT4G25100"
/gene_synonym="ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1"
/gene_synonym="ATFSD1"
/gene_synonym="F24A6.1"
/gene_synonym="Fe superoxide dismutase 1"
/inference="Similar to RNA sequence,
EST:INSD:BP570544.1,INSD:BP572110.1,INSD:EL232036.1,
INSD:EL043642.1,INSD:BP665441.1,INSD:BP629571.1,
INSD:BP583673.1,INSD:BP578734.1,INSD:EL109191.1,
INSD:EH820377.1,INSD:EH891226.1,INSD:AA597697.1,
INSD:EH803875.1,INSD:AV551690.1,INSD:BP633778.1,
INSD:EL230041.1,INSD:AV787965.1,INSD:EH944408.1,
INSD:R64840.1,INSD:AV543376.1,INSD:BP584333.1,
INSD:BP626971.1,INSD:EL301419.1,INSD:EL224243.1,
INSD:BP597183.1,INSD:EL028954.1,INSD:AV552075.1,
INSD:EL107305.1,INSD:EL041167.1,INSD:BP672054.1,
INSD:BE523073.1,INSD:EL271249.1,INSD:BP628716.1,
INSD:AV787960.1,INSD:BE525684.1,INSD:EH934093.1,
INSD:BP589362.1,INSD:EL125814.1,INSD:EH991701.1,
INSD:BP795269.1,INSD:EL014646.1,INSD:DR373806.1,
INSD:DR312285.1,INSD:DR312289.1,INSD:ES008921.1,
INSD:EL281419.1,INSD:BU636155.1,INSD:BP584565.1,
INSD:BP670231.1,INSD:BP565538.1,INSD:EH843496.1,
INSD:AV820866.1,INSD:EL029873.1,INSD:BP594984.1,
INSD:BE530839.1,INSD:BP633244.1,INSD:BP631250.1,
INSD:EL085509.1,INSD:BE525921.1,INSD:AV536596.1,
INSD:DR312287.1,INSD:DR375044.1,INSD:EL306966.1,
INSD:AV781346.1,INSD:EL293007.1,INSD:BP630180.1,
INSD:BP627861.1,INSD:BP623504.1,INSD:CA782053.1,
INSD:AV547009.1,INSD:BP628456.1,INSD:AV545018.1,
INSD:AV803749.1,INSD:AA713198.1,INSD:AV542722.1,
INSD:BP630574.1,INSD:AV521623.1,INSD:AV786452.1,
INSD:AV786484.1,INSD:BP631092.1,INSD:BP844274.1,
INSD:EH882032.1,INSD:BP596357.1,INSD:AA598034.1,
INSD:AV785802.1,INSD:BP611050.1,INSD:CB253339.1,
INSD:AV545476.1,INSD:BP563116.1,INSD:BP665563.1,
INSD:EL259394.1,INSD:BU636476.1,INSD:EL304041.1,
INSD:BP625317.1,INSD:AV785742.1,INSD:BP629304.1,
INSD:EH843521.1,INSD:AV518150.1,INSD:AA597696.1,
INSD:BP632527.1,INSD:CB261931.1,INSD:EH934338.1,
INSD:DR312286.1,INSD:EL337835.1,INSD:EL115494.1,
INSD:BP623633.1,INSD:EH974051.1,INSD:BU636789.1,
INSD:BP642223.1,INSD:EH892998.1,INSD:BP634625.1,
INSD:AV538400.1,INSD:ES108092.1,INSD:AV544744.1,
INSD:EH827413.1,INSD:BP590430.1,INSD:AV441023.1,
INSD:EL085844.1,INSD:AV563368.1,INSD:EL230665.1,
INSD:BP576038.1,INSD:EL325365.1,INSD:BP651875.1,
INSD:EG483295.1,INSD:EL055507.1,INSD:DR374434.1,
INSD:EH867767.1,INSD:EG483293.1,INSD:R64839.1,
INSD:EH863485.1,INSD:EH947005.1,INSD:BP583440.1,
INSD:EL039099.1,INSD:BP594966.1,INSD:AV561481.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX828254.1"
/note="Fe superoxide dismutase 1 (FSD1); FUNCTIONS IN:
superoxide dismutase activity, copper ion binding;
INVOLVED IN: response to oxidative stress, response to
cadmium ion, removal of superoxide radicals, response to
copper ion, circadian rhythm; LOCATED IN: mitochondrion,
chloroplast, plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Manganese/iron superoxide dismutase,
N-terminal (InterPro:IPR019831), Manganese/iron superoxide
dismutase (InterPro:IPR001189), Manganese/iron superoxide
dismutase, C-terminal (InterPro:IPR019832), Manganese/iron
superoxide dismutase, binding site (InterPro:IPR019833);
BEST Arabidopsis thaliana protein match is: Fe superoxide
dismutase 2 (TAIR:AT5G51100.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25100"
/db_xref="Araport:AT4G25100"
intron_pos 58:0 (1/5)
intron_pos 115:1 (2/5)
intron_pos 138:0 (3/5)
intron_pos 147:0 (4/5)
intron_pos 155:0 (5/5)
BEGIN
1 MSKQTLEFHW GKHHRAYVDN LKKQVLGTEL EGKPLEHIIH STYNNGDLLP AFNNAAQAWN
61 HEFFWESMKP GGGGKPSGEL LALLERDFTS YEKFYEEFNA AAATQFGAGW AWLAYSNEKL
121 KVVKTPNAVN PLVLGSFPLL TIDVWEHAYY LDFQNRRPDY IKTFMTNLVS WEAVSARLEA
181 AKAASA
//