LOCUS AEE85005.1 849 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Riboflavin synthase-like superfamily
protein protein.
ACCESSION CP002687-4498
PROTEIN_ID AEE85005.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G25090"
/gene_synonym="F24A6.3"
/inference="Similar to RNA sequence, EST:INSD:AV552329.1"
/note="Riboflavin synthase-like superfamily protein;
FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation
reduction; LOCATED IN: cytosolic ribosome, vacuole;
EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ferredoxin
reductase-type FAD-binding domain (InterPro:IPR017927),
Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand
1, calcium-binding site (InterPro:IPR018247), EF-hand-like
domain (InterPro:IPR011992), Ferric reductase-like
transmembrane component, N-terminal (InterPro:IPR013130),
Ferric reductase, NAD binding (InterPro:IPR013121), NADPH
oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2
(InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112),
Riboflavin synthase-like beta-barrel (InterPro:IPR017938);
BEST Arabidopsis thaliana protein match is:
NADPH/respiratory burst oxidase protein D
(TAIR:AT5G51060.1); Has 2591 Blast hits to 2460 proteins
in 416 species: Archae - 12; Bacteria - 368; Metazoa -
707; Fungi - 773; Plants - 526; Viruses - 0; Other
Eukaryotes - 205 (source: NCBI BLink)."
/db_xref="TAIR:AT4G25090"
/db_xref="Araport:AT4G25090"
intron_pos 135:1 (1/10)
intron_pos 187:2 (2/10)
intron_pos 204:0 (3/10)
intron_pos 242:0 (4/10)
intron_pos 388:0 (5/10)
intron_pos 519:0 (6/10)
intron_pos 589:2 (7/10)
intron_pos 624:0 (8/10)
intron_pos 641:2 (9/10)
intron_pos 814:1 (10/10)
BEGIN
1 MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG
61 LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK TDGNAAWTVV EKRYLKITAN
121 TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR
181 LITFFDLMDK DSDGRLTEDE VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI
241 MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS
301 WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC
361 RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH SVSHLACDFP LLIAATPAEY
421 MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK
481 LASFNAFWYT HHLFVIVYIL LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR
541 SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD
601 DYLSVHIKAL GDWTEAIQGV FSEVSKPPPV GDMLNGANSP RFPKIMIDGP YGAPAQDYKK
661 YEVVLLIGLG IGATPMISII KDIINNTETK EQLSQMEKGS PQEQQGNKET FKTRRAYFYW
721 VTKEQGTFDW FKNIMNEIAE RDKSKVIELH NHCTSVYEEG DVRSALIRML QSLNYAKNGL
781 DIVAGTRVMS HFARPNWKNV YKQIAMDHPG ANVGVFYCGA PVLTKELRQL ALEFTHKTST
841 RFSFHKENF
//