LOCUS AEE84913.1 678 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB geranylgeranyl transferase alpha
subunit 1 protein.
ACCESSION CP002687-4366
PROTEIN_ID AEE84913.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RGTA1"
/locus_tag="AT4G24490"
/gene_synonym="ATRGTA1"
/gene_synonym="RAB geranylgeranyl transferase alpha
subunit 1"
/inference="Similar to RNA sequence,
EST:INSD:EL337251.1,INSD:DR366965.1,INSD:DR258357.1,
INSD:DR366946.1,INSD:DR366958.1,INSD:DR366943.1,
INSD:BP794141.1,INSD:DR366962.1,INSD:DR366966.1,
INSD:DR366949.1,INSD:DR258356.1,INSD:DR366971.1,
INSD:BX835925.1,INSD:DR366956.1,INSD:DR366938.1,
INSD:DR366964.1,INSD:AV808128.1,INSD:AV807822.1,
INSD:DR366967.1,INSD:DR366933.1,INSD:DR366955.1,
INSD:DR366951.1,INSD:DR366969.1,INSD:DR366942.1,
INSD:DR366948.1,INSD:EL986230.1,INSD:DR366959.1,
INSD:DR366947.1,INSD:AV828608.1,INSD:EH981892.1,
INSD:DR366934.1,INSD:DR366936.1,INSD:DR366957.1,
INSD:DR366963.1,INSD:DR366944.1,INSD:DR366945.1,
INSD:AV802082.1,INSD:BP628662.1,INSD:DR366970.1,
INSD:AV564450.1,INSD:BX839834.1,INSD:DR366935.1,
INSD:Z24490.1,INSD:DR366960.1,INSD:DR366941.1,
INSD:EH947076.1,INSD:BX840752.1,INSD:AV809532.1,
INSD:DR366954.1,INSD:BX839948.1,INSD:DR258358.1,
INSD:DR366952.1,INSD:ES098926.1,INSD:DR366953.1,
INSD:EL984153.1,INSD:DR366932.1,INSD:DR366968.1,
INSD:AV819991.1,INSD:BP668850.1,INSD:EG522071.1,
INSD:DR366939.1,INSD:DR366940.1,INSD:DR366950.1,
INSD:AV830003.1,INSD:BP667630.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY117358.1,INSD:BX827902.1,INSD:AY072209.1"
/note="RAB geranylgeranyl transferase alpha subunit 1
(RGTA1); FUNCTIONS IN: protein prenyltransferase activity;
INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Protein prenyltransferase
(InterPro:IPR008940), Protein prenyltransferase, alpha
subunit (InterPro:IPR002088); BEST Arabidopsis thaliana
protein match is: RAB geranylgeranyl transferase alpha
subunit 2 (TAIR:AT5G41820.1); Has 3834 Blast hits to 3112
proteins in 396 species: Archae - 22; Bacteria - 493;
Metazoa - 1923; Fungi - 431; Plants - 375; Viruses - 2;
Other Eukaryotes - 588 (source: NCBI BLink)."
/db_xref="TAIR:AT4G24490"
/db_xref="Araport:AT4G24490"
intron_pos 39:2 (1/7)
intron_pos 94:0 (2/7)
intron_pos 147:2 (3/7)
intron_pos 182:2 (4/7)
intron_pos 432:2 (5/7)
intron_pos 493:0 (6/7)
intron_pos 550:1 (7/7)
BEGIN
1 MHGRPRNASK PEEEAASAAK AVQLRSLQSQ FMTNHHDKIY TNEAIELSTK LLEINPEAYT
61 AWNYRKLAVE DRLARIEPDP NLVSAILDEE LRVVESALRQ NFKSYGAWHH RKWVLSKGHS
121 SVGNELRLLE KFQKLDSRNF HAWNYRRFVV ELTNRSEQDE LQYTDDMINN NFSNYSAWHN
181 RSVLLSSLLA QNADGFMPNI KIPEEYDFVH SAIFTEPDDQ SGWFYHLWLL DQTLNVETPL
241 LTSSWPSHGS SIILSGAGCL SGSSSMFTTF CSESGSFPLI LYFDQAVGGV SSSTVTIDSE
301 LKGNEGLVWE PIPNKNSQVS CVWVARLKYV SSDPCEYKVK IRVGNSPGIV SSRGYNFNAP
361 YEFVFTAHVH DTVEDSQEGI VSWTDGFDIW DAKSKDLNSL VTLDRLNAEM DFKWRQEAID
421 SEVECFGILP DSKIGKLTLA RLLMAREAMV SDDAVKGVHY EEILQLYNDL MALDSSHYQY
481 YKDEHSKAFL HKVTSSSESL SRHLLRYRDM NNLVCLRLNN LSLSRIASVE KLLFVQMLDL
541 SHNELHSTEG LEAMQLLSCL NLSHNRIRSF SALDSLRHVK QLKVLDVSHN HIGKHSVDTT
601 RYLCSSPLSN SELGQDDVGK QNPGLVTKYW DAYCVLTDLN LKQLDIAGNE IAGEEFSSFV
661 LQVVPKLVWL DGQKKLGN
//