LOCUS AEE84909.1 309 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana GATA-type zinc finger protein with
TIFY domain-containing protein protein.
ACCESSION CP002687-4361
PROTEIN_ID AEE84909.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ZIM"
/locus_tag="AT4G24470"
/gene_synonym="AtTIFY1"
/gene_synonym="GATA TRANSCRIPTION FACTOR 25"
/gene_synonym="GATA25"
/gene_synonym="T22A6.300"
/gene_synonym="T22A6_300"
/gene_synonym="TIFY1"
/gene_synonym="Zinc-finger protein expressed in
Inflorescence Meristem"
/inference="Similar to RNA sequence,
EST:INSD:EL267200.1,INSD:DR220723.1,INSD:ES170497.1,
INSD:EH862540.1,INSD:DR220719.1,INSD:EL169421.1,
INSD:BP644653.1,INSD:DR220744.1,INSD:DR220726.1,
INSD:AU228920.1,INSD:DR220730.1,INSD:BP849734.1,
INSD:BP648750.1,INSD:BP667686.1,INSD:DR220727.1,
INSD:DR220731.1,INSD:DR220743.1,INSD:BP648421.1,
INSD:DR220729.1,INSD:DR220736.1,INSD:EG485158.1,
INSD:BP635754.1,INSD:ES199657.1,INSD:ES169981.1,
INSD:DR220735.1,INSD:ES187859.1,INSD:DR220737.1,
INSD:DR220733.1,INSD:DR220720.1,INSD:DR220739.1,
INSD:DR220722.1,INSD:BP652376.1,INSD:EL206882.1,
INSD:ES035181.1,INSD:ES132891.1,INSD:EL239876.1,
INSD:ES072956.1,INSD:AU237826.1,INSD:ES125246.1,
INSD:DR220741.1,INSD:DR220740.1,INSD:EH938915.1,
INSD:ES136519.1,INSD:DR220721.1,INSD:BP647836.1,
INSD:BP645204.1,INSD:DR220728.1,INSD:DR220725.1,
INSD:ES031461.1,INSD:DR751638.1,INSD:DR751651.1,
INSD:Z34625.1,INSD:DR220724.1,INSD:BP816599.1,
INSD:EL063684.1,INSD:EL065426.1,INSD:EG485157.1,
INSD:DR220734.1,INSD:ES043626.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY086038.1,INSD:AB035310.1"
/note="TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger,
NHR/GATA-type (InterPro:IPR013088), Tify
(InterPro:IPR010399), CCT domain (InterPro:IPR010402),
Zinc finger, GATA-type (InterPro:IPR000679); BEST
Arabidopsis thaliana protein match is: ZIM-LIKE 2
(TAIR:AT1G51600.2); Has 1524 Blast hits to 1503 proteins
in 175 species: Archae - 0; Bacteria - 0; Metazoa - 21;
Fungi - 686; Plants - 776; Viruses - 0; Other Eukaryotes -
41 (source: NCBI BLink)."
/db_xref="TAIR:AT4G24470"
/db_xref="Araport:AT4G24470"
intron_pos 103:0 (1/6)
intron_pos 133:0 (2/6)
intron_pos 177:2 (3/6)
intron_pos 213:2 (4/6)
intron_pos 249:0 (5/6)
intron_pos 269:0 (6/6)
BEGIN
1 MFGRHSIIPN NQIGTASASA GEDHVSASAT SGHIPYDDME EIPHPDSIYG AASDLIPDGS
61 QLVAHRSDGS ELLVSRPPEG ANQLTISFRG QVYVFDAVGA DKVDAVLSLL GGSTELAPGP
121 QVMELAQQQN HMPVVEYQSR CSLPQRAQSL DRFRKKRNAR CFEKKVRYGV RQEVALRMAR
181 NKGQFTSSKM TDGAYNSGTD QDSAQDDAHP EISCTHCGIS SKCTPMMRRG PSGPRTLCNA
241 CGLFWANRGT LRDLSKKTEE NQLALMKPDD GGSVADAANN LNTEAASVEE HTSMVSLANG
301 DNSNLLGDH
//