LOCUS AEE84881.1 816 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana EMBRYO DEFECTIVE 140 protein.
ACCESSION CP002687-4315
PROTEIN_ID AEE84881.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="EMB140"
/locus_tag="AT4G24270"
/gene_synonym="EMBRYO DEFECTIVE 140"
/gene_synonym="T22A6.100"
/gene_synonym="T22A6_100"
/inference="Similar to RNA sequence,
EST:INSD:ES214842.1,INSD:EH871739.1,INSD:EH924139.1,
INSD:AV799775.1,INSD:BX839635.1,INSD:BX839799.1,
INSD:ES063471.1,INSD:EL083078.1,INSD:EL154774.1,
INSD:AV827893.1,INSD:ES082090.1,INSD:ES075880.1,
INSD:ES034648.1,INSD:ES035600.1,INSD:ES125094.1,
INSD:ES160370.1,INSD:ES027519.1,INSD:BE530789.1,
INSD:EH914999.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY075670.1"
/note="EMBRYO DEFECTIVE 140 (EMB140); FUNCTIONS IN: RNA
binding, nucleotide binding, nucleic acid binding;
INVOLVED IN: embryo development ending in seed dormancy;
LOCATED IN: intracellular; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Lsm interaction (InterPro:IPR008669),
RNA-processing protein, HAT helix (InterPro:IPR003107),
RNA recognition motif, RNP-1 (InterPro:IPR000504),
Nucleotide-binding, alpha-beta plait (InterPro:IPR012677);
BEST Arabidopsis thaliana protein match is: crooked neck
protein, putative / cell cycle protein, putative
(TAIR:AT5G45990.1); Has 6865 Blast hits to 6296 proteins
in 569 species: Archae - 0; Bacteria - 876; Metazoa -
2538; Fungi - 1681; Plants - 1001; Viruses - 0; Other
Eukaryotes - 769 (source: NCBI BLink)."
/db_xref="TAIR:AT4G24270"
/db_xref="Araport:AT4G24270"
intron_pos 72:0 (1/15)
intron_pos 116:2 (2/15)
intron_pos 135:0 (3/15)
intron_pos 207:0 (4/15)
intron_pos 299:0 (5/15)
intron_pos 344:0 (6/15)
intron_pos 386:0 (7/15)
intron_pos 401:0 (8/15)
intron_pos 436:0 (9/15)
intron_pos 483:2 (10/15)
intron_pos 525:0 (11/15)
intron_pos 550:0 (12/15)
intron_pos 662:0 (13/15)
intron_pos 693:0 (14/15)
intron_pos 741:1 (15/15)
BEGIN
1 MMADDTELVS NTDQKMEDAS AENPARADPP SSDDSGDSDS DSEDEAESNQ QIVTLESELS
61 ANPYNYDAYV QYIKLLRKTA NLEKLRQARE AMSAIFPLSP SLWLEWARDE ASLAASENVP
121 EIVMLYERGL SDYQSVSLWC DYLSFMLEFD PSVRGYPSEG ISKMRSLFER AIPAAGFHVT
181 EGNRIWEGYR EFEQGVLATI DEADIEERNK QIQRIRSIFH RHLSVPLENL SSTLIAYKTW
241 ELEQGIDLDI GSDDLSKVSH QVAVANKKAQ QMYSERAHLE ENISKQDLSD TEKFQEFMNY
301 IKFEKTSGDP TRVQAIYERA VAEYPVSSDL WIDYTVYLDK TLKVGKAITH AYSRATRSCP
361 WTGDLWARYL LALERGSASE KEIYDVFEKS LQCTFSSFEE YLDLYLTRVD GLRRRMLSTR
421 MLEALDYSLI RETFQQASDY LTPHMQNTDS LLHLHTYWAN LELNIGKDLA GARGVWDSFL
481 KKSGGMLAAW HAYIDMEVHL GHIKEARSIY RRCYTRKFDG TGSEDICKGW LRFEREHGDL
541 EHFDLAVQKV MPRLEELQLM RLQQESTPVK PSAGLKEHSS QKRKAEQNVE EESLAKRQKR
601 KSQKEVDLGG QSATVPATKN VKAENGKTAD SDKEETEDAK PLKPKVYRDE CTAFISNLSV
661 KAQEEDIRKF FGDDGGVDSI RILHHKDTGK PRGLAYADFV DDEHLAAAIA KNRKMFFGKK
721 ISIARSNPKK GKKEFTRRGN DGSGNSKDPS LISEKAKAPL GGETEGERKG NEVEVRGKNT
781 FAVPRNVKPL GYTTPKPSAD ETPKSNDEFR NMFLKK
//