LOCUS AEE84835.1 638 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana auxin response factor 9 protein.
ACCESSION CP002687-4245
PROTEIN_ID AEE84835.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ARF9"
/locus_tag="AT4G23980"
/gene_synonym="auxin response factor 9"
/gene_synonym="T32A16.150"
/gene_synonym="T32A16_150"
/inference="Similar to RNA sequence,
EST:INSD:EH933424.1,INSD:BP801911.1,INSD:BP824881.2,
INSD:CB264659.1,INSD:BP836134.1,INSD:AU226972.1,
INSD:ES157157.1,INSD:EH952890.1,INSD:BP571348.1,
INSD:EL063827.1,INSD:EL007608.1,INSD:BX834929.1,
INSD:BP608863.1,INSD:BP603299.1,INSD:EG467439.1,
INSD:CF651697.1,INSD:BP655293.1,INSD:ES167338.1,
INSD:EH838859.1,INSD:BP835194.1,INSD:EH988443.1,
INSD:EL322736.1,INSD:EL043945.1,INSD:BP599917.1,
INSD:BP562776.1,INSD:BX834951.1,INSD:BP824247.1,
INSD:BP801317.1,INSD:EL102331.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK228263.1,INSD:BX828656.1,INSD:AF082176.1,
INSD:AK221865.1,INSD:AF344312.1,INSD:BX828437.1"
/note="auxin response factor 9 (ARF9); FUNCTIONS IN:
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: regulation of transcription,
DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation
(InterPro:IPR011525), Transcriptional factor B3
(InterPro:IPR003340), AUX/IAA protein
(InterPro:IPR003311), Auxin response factor
(InterPro:IPR010525); BEST Arabidopsis thaliana protein
match is: auxin response factor 11 (TAIR:AT2G46530.1); Has
2797 Blast hits to 2432 proteins in 108 species: Archae -
0; Bacteria - 0; Metazoa - 49; Fungi - 2; Plants - 2739;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink)."
/db_xref="TAIR:AT4G23980"
/db_xref="Araport:AT4G23980"
intron_pos 6:1 (1/13)
intron_pos 42:0 (2/13)
intron_pos 75:0 (3/13)
intron_pos 94:0 (4/13)
intron_pos 146:0 (5/13)
intron_pos 174:1 (6/13)
intron_pos 204:2 (7/13)
intron_pos 259:2 (8/13)
intron_pos 297:2 (9/13)
intron_pos 322:0 (10/13)
intron_pos 371:1 (11/13)
intron_pos 528:0 (12/13)
intron_pos 590:2 (13/13)
BEGIN
1 MANRGGEYLY DELWKLCAGP LVDVPQAQER VYYFPQGHME QLEASTQQVD LNTMKPLFVL
61 PPKILCNVMN VSLQAEKDTD EVYAQITLIP VGTEVDEPMS PDPSPPELQR PKVHSFSKVL
121 TASDTSTHGG FSVLRKHATE CLPPLDMTQQ TPTQELVAED VHGYQWKFKH IFRGQPRRHL
181 LTTGWSTFVT SKRLVAGDTF VFLRGENGEL RVGVRRANLQ QSSMPSSVIS SHSMHLGVLA
241 TARHATQTKT MFIVYYKPRT SQFIISLNKY LEAMSNKFSV GMRFKMRFEG EDSPERRYSG
301 TVIGVKDCSP HWKDSKWRCL EVHWDEPASI SRPNKVSPWE IEPFVNSENV PKSVMLKNKR
361 PRQVSEVSAL DVGITASNLW SSVLTQPHEF AQSCITSQWS SPQQCHRDAN EDAKKSDWLN
421 NSYSVSNVAK DSTLNDQMVS PVEQKKPETT ANYRLFGIDL MSSSLAVPEE KTAPMRPINI
481 SKPTMDSHSD PKSEISKVSE EKKQEPAEGS PKEVQSKQSS STRSRTKVQM QGVPVGRAVD
541 LNALKGYNEL IDDIEKLFDI KGELRSRNQW EIVFTDDEGD MMLVGDDPWP EFCNMVKRIF
601 IWSKEEVKKM TPGNQLRMLL REVETTLTTT SKTDNHSN
//