LOCUS AEE84807.1 456 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana HMG (high mobility group) box protein protein.
ACCESSION CP002687-4214
PROTEIN_ID AEE84807.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="3xHMG-box2"
/locus_tag="AT4G23800"
/gene_synonym="3xHigh Mobility Group-box2"
/inference="Similar to RNA sequence,
EST:INSD:ES027450.1,INSD:EG514739.1,INSD:ES181359.1,
INSD:ES130174.1,INSD:ES032209.1,INSD:ES104136.1,
INSD:AF326886.1,INSD:EG500359.1,INSD:EH911819.1,
INSD:DR750659.1,INSD:AV824506.1,INSD:ES000436.1,
INSD:DR359255.1,INSD:ES073061.1,INSD:ES014818.1,
INSD:DR350884.1,INSD:BP572372.1,INSD:ES098925.1,
INSD:DR262810.1,INSD:ES187047.1,INSD:DR262812.1,
INSD:ES048305.1,INSD:ES125856.1,INSD:ES146843.1,
INSD:ES061352.1,INSD:DR359266.1,INSD:EL972147.1,
INSD:EH861355.1,INSD:BE662917.1,INSD:EL161633.1,
INSD:EL998110.1,INSD:BP563602.1,INSD:BP837748.1,
INSD:ES037044.1,INSD:DR262808.1,INSD:ES143230.1,
INSD:BP637170.1,INSD:ES106169.1,INSD:EL330126.1,
INSD:ES164531.1,INSD:ES097166.1,INSD:ES201767.1,
INSD:ES208134.1,INSD:EL984035.1,INSD:ES199977.1,
INSD:DR359258.1,INSD:EL092777.1,INSD:DR262809.1,
INSD:AU226624.1,INSD:EG515436.1,INSD:ES036308.1,
INSD:EH827257.1,INSD:ES214039.1,INSD:AV787982.1,
INSD:ES113921.1,INSD:DR359261.1,INSD:ES100010.1,
INSD:ES057781.1,INSD:EH908660.1,INSD:BP815546.1,
INSD:ES033658.1,INSD:EG500358.1,INSD:DR359254.1,
INSD:EL341364.1,INSD:BP834489.1,INSD:CD533936.1,
INSD:ES199196.1,INSD:ES105977.1,INSD:ES006321.1,
INSD:EL978399.1,INSD:DR380767.1,INSD:EG420130.1,
INSD:DR359256.1,INSD:ES104545.1,INSD:DR262806.1,
INSD:ES199346.1,INSD:ES080736.1,INSD:ES138305.1,
INSD:EL089454.1,INSD:BP617723.1,INSD:EL218799.1,
INSD:ES031197.1,INSD:EG514727.1,INSD:CD533127.1,
INSD:ES016042.1,INSD:CD532284.1,INSD:DR359262.1,
INSD:EH900782.1,INSD:EL017177.1,INSD:ES038702.1,
INSD:DR359272.1,INSD:ES143301.1,INSD:ES176039.1,
INSD:EL167462.1,INSD:ES131614.1,INSD:DR750669.1,
INSD:T88664.1,INSD:DR750210.1,INSD:ES166191.1,
INSD:BP574710.1,INSD:EL202308.1,INSD:BP795997.1,
INSD:ES105142.1,INSD:DR359271.1,INSD:CD529994.1,
INSD:EG515435.1,INSD:DR350886.1,INSD:DR359263.1,
INSD:ES038342.1,INSD:ES209439.1,INSD:EH956861.1,
INSD:DR359270.1,INSD:AI993502.1,INSD:ES195397.1,
INSD:DR359269.1,INSD:DR359259.1,INSD:ES042048.1,
INSD:BP581690.1,INSD:EL216817.1,INSD:ES180981.1,
INSD:EL237577.1,INSD:EH900248.1,INSD:ES031358.1,
INSD:BP570602.1,INSD:BP583343.1,INSD:BP577992.1,
INSD:ES122633.1,INSD:DR359267.1,INSD:ES203739.1,
INSD:BP600137.1,INSD:BP569383.1,INSD:ES162458.1,
INSD:DR262814.1,INSD:AV786432.1,INSD:ES019196.1,
INSD:ES156214.1,INSD:EL977969.1,INSD:ES059834.1,
INSD:AF349518.1,INSD:BX835597.1,INSD:ES162574.1,
INSD:ES070051.1,INSD:DR262811.1,INSD:DR262807.1,
INSD:EL200893.1,INSD:DR359252.1,INSD:DR359250.1,
INSD:DR359260.1,INSD:ES092961.1,INSD:DR359249.1,
INSD:EL241122.1,INSD:ES022709.1,INSD:ES053600.1,
INSD:DR359253.1,INSD:ES129669.1,INSD:DR350885.1,
INSD:EG514143.1,INSD:ES071903.1,INSD:DR359264.1,
INSD:ES007302.1,INSD:CD534808.1,INSD:ES208369.1,
INSD:DR359265.1,INSD:AV534103.1,INSD:CD530621.1,
INSD:EH851788.1,INSD:EL144902.1,INSD:EG514573.1,
INSD:EH943186.1,INSD:ES020959.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY125491.1,INSD:AY096398.1,INSD:AY074353.1"
/note="HMG (high mobility group) box protein; FUNCTIONS
IN: sequence-specific DNA binding transcription factor
activity; LOCATED IN: nucleus, chloroplast; EXPRESSED IN:
20 plant structures; EXPRESSED DURING: 11 growth stages;
CONTAINS InterPro DOMAIN/s: High mobility group,
superfamily (InterPro:IPR009071), High mobility group,
HMG1/HMG2 (InterPro:IPR000910); BEST Arabidopsis thaliana
protein match is: HMG (high mobility group) box protein
(TAIR:AT4G11080.1); Has 73209 Blast hits to 39847 proteins
in 2254 species: Archae - 389; Bacteria - 7210; Metazoa -
37524; Fungi - 4636; Plants - 3006; Viruses - 229; Other
Eukaryotes - 20215 (source: NCBI BLink)."
/db_xref="TAIR:AT4G23800"
/db_xref="Araport:AT4G23800"
intron_pos 111:0 (1/7)
intron_pos 247:2 (2/7)
intron_pos 283:0 (3/7)
intron_pos 305:0 (4/7)
intron_pos 362:0 (5/7)
intron_pos 390:2 (6/7)
intron_pos 419:0 (7/7)
BEGIN
1 MATNADPAPT KKPRNSRKAL KQKNELVETP PSPVSVKGKS AKSFEQDLME MQTMLEKMKI
61 EKDKTEELLK EKDEILRKKE EELETRDAEQ EKLKVELKKL QKMKEFKPNM TFACGQSSLT
121 QAEQEKANKK KKKDCPETKR PSSSYVLWCK DQWTEVKKEN PEADFKETSN ILGAKWKSLS
181 AEDKKPYEER YQVEKEAYLQ VIAKEKREKE AMKLLEDDQK QRTAMELLDQ YLNFVQEAEQ
241 DNKKKNKKEK DPLKPKHPVS AFLVYANERR AALREENKSV VEVAKITGEE WKNLSDKKKA
301 PYEKVAKKNK ETYLQAMEEY KRTKEEEALS QKKEEEELLK LHKQEALQML KKKEKTDNLI
361 KKEKATKKKK NENVDPNKPK KPASSYFLFS KDERKKLTEE RPGTNNATVT ALISLKWKEL
421 SEEEKQVYNG KAAKLMEAYK KEVEAYNKKS AATTSS
//