LOCUS AEE84785.1 264 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain-containing protein protein.
ACCESSION CP002687-4183
PROTEIN_ID AEE84785.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G23620"
/gene_synonym="F9D16.90"
/gene_synonym="F9D16_90"
/inference="Similar to RNA sequence,
EST:INSD:DR351779.1,INSD:DR351785.1,INSD:DR351778.1,
INSD:AV827382.1,INSD:DR351773.1,INSD:AV543009.1,
INSD:AV543407.1,INSD:DR351782.1,INSD:N37250.1,
INSD:DR351781.1,INSD:ES065813.1,INSD:DR351784.1,
INSD:AV798049.1,INSD:CD532947.1,INSD:DR351783.1,
INSD:DR371022.1,INSD:BP571651.1,INSD:DR351780.1,
INSD:AV559727.1,INSD:CD531208.1,INSD:AV535786.1,
INSD:DR351777.1,INSD:EL005537.1,INSD:T76734.1,
INSD:AV814354.1,INSD:DR351775.1,INSD:AV831013.1,
INSD:ES062340.1,INSD:DR351787.1,INSD:DR351774.1,
INSD:DR351786.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827024.1,INSD:AY072437.1,INSD:AY114723.1,
INSD:AY088412.1"
/note="Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain; FUNCTIONS IN: cobalt ion
binding, zinc ion binding; INVOLVED IN: translation;
LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 12 growth stages;
CONTAINS InterPro DOMAIN/s: Ribosomal protein L25,
N-terminal (InterPro:IPR020055), Ribosomal protein L25
(InterPro:IPR001021), Ribosomal protein L25, beta domain
(InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA
synthetase, anti-codon-binding domain
(InterPro:IPR011035); BEST Arabidopsis thaliana protein
match is: Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain (TAIR:AT5G66860.1); Has 3887
Blast hits to 3887 proteins in 1083 species: Archae - 0;
Bacteria - 2293; Metazoa - 0; Fungi - 0; Plants - 72;
Viruses - 0; Other Eukaryotes - 1522 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G23620"
/db_xref="Araport:AT4G23620"
intron_pos 143:0 (1/2)
intron_pos 186:1 (2/2)
BEGIN
1 MLLRRAKTLP KTLQNLRLFS PAANAALSLD HIQETQLTYL PGFPRPDPKH AETILAVPRS
61 VSGKSISAKE RKAGRVPSII FEQEDGQHGG NKRLISVQTN QIRKLVNHLG YSFFLSRLFD
121 VEVRAEIGSD EVIEKVRALP RAIHLHSGTD APLNVTFIRA PPGALLKVDI PLVFIGDDVS
181 PGLKKGASLN TIKRTVKFLC PAEIIPPYIE VDLSQLDIGQ KLVMGDLKVH PALKLIKSKD
241 EPIVKVAGGR VTDTQKKSSD TQKK
//