LOCUS AEE84777.1 350 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phosphatase-like protein protein.
ACCESSION CP002687-4176
PROTEIN_ID AEE84777.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SGT1A"
/locus_tag="AT4G23570"
/gene_synonym="F9D16.40"
/gene_synonym="F9D16_40"
/inference="Similar to RNA sequence,
EST:INSD:EL140521.1,INSD:BP663818.1,INSD:BP854697.1,
INSD:F14005.1,INSD:EH836740.1,INSD:EL331270.1,
INSD:EL131008.1,INSD:EL987530.1,INSD:EL266771.1,
INSD:BP661119.1,INSD:DR232231.1,INSD:EH838453.1,
INSD:EL049329.1,INSD:AV786588.1,INSD:BP865366.1,
INSD:AV557241.1,INSD:EH818440.1,INSD:ES106432.1,
INSD:BP865256.1,INSD:EH977121.1,INSD:AI999599.1,
INSD:BE529297.1,INSD:EL117244.1,INSD:EL285331.1,
INSD:EH852660.1,INSD:EH977260.1,INSD:AV807763.1,
INSD:AV528071.1,INSD:AV824545.1,INSD:EL084529.1,
INSD:EL069577.1,INSD:EL008873.1,INSD:EL196469.1,
INSD:EL253934.1,INSD:EH818750.1,INSD:AV525413.1,
INSD:BX837055.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY096395.1,INSD:AY063978.1"
/note="SGT1A; FUNCTIONS IN: protein binding; INVOLVED IN:
defense response, ubiquitin-dependent protein catabolic
process, embryo development ending in seed dormancy;
LOCATED IN: SCF ubiquitin ligase complex, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Tetratricopeptide TPR-1 (InterPro:IPR001440),
Tetratricopeptide-like helical (InterPro:IPR011990), SGS
(InterPro:IPR007699), HSP20-like chaperone
(InterPro:IPR008978), CS domain (InterPro:IPR017447),
CS-like domain (InterPro:IPR007052), Tetratricopeptide
repeat-containing (InterPro:IPR013026), Tetratricopeptide
repeat (InterPro:IPR019734); BEST Arabidopsis thaliana
protein match is: phosphatase-related (TAIR:AT4G11260.1);
Has 12440 Blast hits to 8629 proteins in 714 species:
Archae - 442; Bacteria - 3949; Metazoa - 2875; Fungi -
1120; Plants - 1288; Viruses - 0; Other Eukaryotes - 2766
(source: NCBI BLink)."
/db_xref="TAIR:AT4G23570"
/db_xref="Araport:AT4G23570"
intron_pos 54:1 (1/9)
intron_pos 77:2 (2/9)
intron_pos 119:1 (3/9)
intron_pos 153:2 (4/9)
intron_pos 186:0 (5/9)
intron_pos 208:0 (6/9)
intron_pos 254:1 (7/9)
intron_pos 281:0 (8/9)
intron_pos 316:0 (9/9)
BEGIN
1 MAKELADKAK EAFVDDDFDV AVDLYSKAID LDPNCAEFFA DRAQAYIKLE SFTEAVADAN
61 KAIELDPSLT KAYLRKGTAC MKLEEYRTAK TALEKGASIT PSESKFKKLI DECNFLITEE
121 EKDLVQPVPS TLPSSVTAPP VSELDVTPTA KYRHEYYQKP EEVVVTVFAK GIPKQNVNID
181 FGEQILSVVI EVPGEDAYYL QPRLFGKIIP DKCKYEVLST KIEICLAKAD IITWASLEHG
241 KGPAVLPKPN VSSEVSQRPA YPSSKKVKDW DKLEAEVKKQ EKDEKLEGDA ALNKFFREIY
301 QNADEDMRRA MSKSFVESNG TVLSTNWQEV GTKTIESTPP DGMELKKWEI
//