LOCUS AEE84761.1 893 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Adaptin family protein protein.
ACCESSION CP002687-4154
PROTEIN_ID AEE84761.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G23460"
/inference="Similar to RNA sequence,
EST:INSD:BP779054.1,INSD:ES202566.1,INSD:EL024545.1,
INSD:ES172342.1,INSD:EH874627.1,INSD:BP793188.1,
INSD:BP817213.1,INSD:EL139029.1,INSD:AV793152.1,
INSD:BP780354.1,INSD:ES199718.1,INSD:ES019940.1,
INSD:ES189310.1,INSD:AV555938.1,INSD:AV804651.1,
INSD:EL147994.1,INSD:AV825980.1,INSD:AV800549.1,
INSD:EL085923.1,INSD:EG517571.1,INSD:ES145024.1,
INSD:EL258093.1,INSD:EL152490.1,INSD:EH961077.1,
INSD:BE527930.1,INSD:ES017131.1,INSD:BP780276.1,
INSD:ES066519.1,INSD:EG517570.1,INSD:AV813418.1,
INSD:EL242212.1,INSD:CB258445.1,INSD:AV545968.1,
INSD:AV524339.1,INSD:Z25634.1,INSD:AV523901.1,
INSD:EH993379.1,INSD:AV803607.1,INSD:AV529668.1,
INSD:BP788720.1,INSD:BX839674.1,INSD:AV528147.1,
INSD:AV524324.1,INSD:Z33761.1,INSD:ES207124.1,
INSD:EH966161.1,INSD:AV530221.1,INSD:AV566173.1,
INSD:AV793133.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF216387.1,INSD:AY065000.1,INSD:BX826897.1"
/note="Adaptin family protein; FUNCTIONS IN: protein
transporter activity, clathrin binding, binding; INVOLVED
IN: intracellular protein transport, vesicle-mediated
transport, protein transport; LOCATED IN: plasma membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Clathrin
adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like
subdomain (InterPro:IPR008152), Armadillo-like helical
(InterPro:IPR011989), Clathrin/coatomer adaptor,
adaptin-like, N-terminal (InterPro:IPR002553), Clathrin
adaptor, beta-adaptin, appendage, Ig-like subdomain
(InterPro:IPR013037), Clathrin adaptor, beta-adaptin,
appendage, C-terminal subdomain (InterPro:IPR015151),
Beta2-adaptin/TATA-box binding, C-terminal
(InterPro:IPR012295), Armadillo-type fold
(InterPro:IPR016024), Clathrin/coatomer adaptor,
adaptin-like, appendage, C-terminal subdomain
(InterPro:IPR009028), Adaptor protein complex, beta
subunit (InterPro:IPR016342), Clathrin/coatomer adaptor,
adaptin-like, appendage, Ig-like subdomain
(InterPro:IPR013041); BEST Arabidopsis thaliana protein
match is: Adaptin family protein (TAIR:AT4G11380.1); Has
3513 Blast hits to 3431 proteins in 288 species: Archae -
10; Bacteria - 22; Metazoa - 1477; Fungi - 873; Plants -
441; Viruses - 0; Other Eukaryotes - 690 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G23460"
/db_xref="Araport:AT4G23460"
intron_pos 30:0 (1/14)
intron_pos 96:0 (2/14)
intron_pos 134:0 (3/14)
intron_pos 217:2 (4/14)
intron_pos 263:0 (5/14)
intron_pos 323:0 (6/14)
intron_pos 354:0 (7/14)
intron_pos 424:2 (8/14)
intron_pos 446:0 (9/14)
intron_pos 506:0 (10/14)
intron_pos 537:0 (11/14)
intron_pos 663:2 (12/14)
intron_pos 727:0 (13/14)
intron_pos 795:0 (14/14)
BEGIN
1 MSGHDSKYFS TTKKGEIPEL KEELNSQYKD KRKDAVKKVI AAMTVGKDVS SLFTDVVNCM
61 QTENLELKKL VYLYLINYAK SQPDLAILAV NTFVKDSQDP NPLIRALAVR TMGCIRVDKI
121 TEYLCDPLQK CLKDDDPYVR KTAAICVAKL FDINAELVED RGFLEALKDL ISDNNPMVVA
181 NAVAALAEIQ ENSTSPIFEI NSTILTKLLT ALNECTEWGQ VFILDALSRY KASDPREAEN
241 IVERVTPRLQ HANCAVVLSA VKMILQQMEL ITSTDVIRNL CKKMAPPLVT LLSAEPEIQY
301 VALRNINLIV QKRPTILAHE IKVFFCKYND PIYVKMEKLE IMIKLASDRN IDQVLLEFKE
361 YATEVDVDFV RKAVRAIGRC AIKLERAAER CISVLLELIK IKVNYVVQEA IIVIKDIFRR
421 YPNTYESIIA TLCESLDTLD EPEAKASMIW IIGEYAERID NADELLESFL ENFPEEPAQV
481 QLQLLTATVK LFLKKPTEGP QQMIQVVLNN ATVETDNPDL RDRAYIYWRL LSTDPEAAKD
541 VVLAEKPVIT DDSNQLDPSL LDELLANIST LSSVYHKPPE AFVTRLKTTV QKTEDEDYVE
601 GSETGYPEAS GNPVDGAASP SATTGYVTKL AAAPAPVPDL LGDLMGSDNA AIVPVDEPTT
661 PSGRPLPVVL PASKGQGLQI SAQLTRQDGQ VFYSMLLENN SQSLLDGFMI QFNKNSFGLA
721 AVGSLQVPPL QPGASARTMM PMVLSQNMST GSTSSVLQVA VKNNQQPVWY FEDKIVLNAL
781 FSEDGRMERG TFLETWKSLP DSNEVQKEFP GITITSVEST LDLLAASNMF FIAKRKNGNQ
841 DVLYLSAKVP RGIPFLIELT AIVGQPGLKC AVKTPTPEIA PLFFEAVEIL FKA
//