LOCUS AEE84605.2 369 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana U4/U6.U5 tri-snRNP-associated-like
protein protein.
ACCESSION CP002687-3944
PROTEIN_ID AEE84605.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G22410"
/gene_synonym="F7K2.7"
/gene_synonym="F7K2_7"
/inference="Similar to RNA sequence,
EST:INSD:ES196161.1,INSD:EL982358.1,INSD:ES133211.1"
/note="Ubiquitin C-terminal hydrolases superfamily
protein; FUNCTIONS IN: ubiquitin thiolesterase activity,
zinc ion binding; INVOLVED IN: ubiquitin-dependent protein
catabolic process; LOCATED IN: endomembrane system,
intracellular; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880),
Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
(InterPro:IPR001394); BEST Arabidopsis thaliana protein
match is: Ubiquitin C-terminal hydrolases superfamily
protein (TAIR:AT4G22285.1); Has 1861 Blast hits to 1844
proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa
- 1101; Fungi - 318; Plants - 235; Viruses - 0; Other
Eukaryotes - 207 (source: NCBI BLink)."
/db_xref="TAIR:AT4G22410"
/db_xref="Araport:AT4G22410"
intron_pos 87:2 (1/6)
intron_pos 116:0 (2/6)
intron_pos 178:0 (3/6)
intron_pos 234:0 (4/6)
intron_pos 280:0 (5/6)
intron_pos 337:1 (6/6)
BEGIN
1 MVEFQVLDFH FERFCSVSLS NLNVYACLVC GKYFQGRSQK SHAYTHSLEA GHHVYINLLT
61 EKVYCLPDSY EINDPSLDDI RHVLNPRFSR AQVNELDKNR QWSRALDGSD YLPGMVGLNN
121 IQKTEFVNVT IQSLMRVTPL RNFFHIPENY QHCKSPLVHC FGELTRKIWH ARNFKGQVSP
181 HEFLQAVMKA SKKRFRIGQQ SDPVEFMSWL LNTLHMDLRT SKDASSIIHK CFQGELEVVK
241 EFQGNENKEI SRMSFLMLGL DLPPPPLFKD VMEKNIIPQV ALFDLLKKFD GETVTEVVRP
301 KLARMRYRVI KSPRYLMFHM VRFKKNNFFK EKNPTLVNFP VKDMELRDYI PSLPRAPEGE
361 KVCSSLFVY
//