LOCUS AEE84602.1 128 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L7Ae/L30e/S12e/
Gadd45 family protein protein.
ACCESSION CP002687-3940
PROTEIN_ID AEE84602.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G22380"
/inference="Similar to RNA sequence,
EST:INSD:EH985971.1,INSD:ES029943.1,INSD:CB263147.1,
INSD:DR370414.1,INSD:ES124383.1,INSD:EL035516.1,
INSD:ES176122.1,INSD:ES151909.1,INSD:DR305051.1,
INSD:EH828620.1,INSD:EH901980.1,INSD:ES106423.1,
INSD:DR305042.1,INSD:DR305063.1,INSD:ES142189.1,
INSD:ES080902.1,INSD:DR305050.1,INSD:EL041354.1,
INSD:EL270376.1,INSD:ES016869.1,INSD:CB258174.1,
INSD:DR305057.1,INSD:DR305062.1,INSD:DR305061.1,
INSD:AV782695.1,INSD:AV782731.1,INSD:DR305040.1,
INSD:DR305046.1,INSD:DR305045.1,INSD:DR305044.1,
INSD:EL195019.1,INSD:EL012596.1,INSD:DR305041.1,
INSD:DR305053.1,INSD:ES136642.1,INSD:EH880039.1,
INSD:DR305056.1,INSD:EH925729.1,INSD:EL027331.1,
INSD:BP794375.1,INSD:EH980989.1,INSD:EL081357.1,
INSD:DR259714.1,INSD:ES123199.1,INSD:EL013767.1,
INSD:ES175547.1,INSD:DR305047.1,INSD:DR377765.1,
INSD:DR305058.1,INSD:DR305055.1,INSD:ES159260.1,
INSD:DR203827.1,INSD:ES183466.1,INSD:DR203829.1,
INSD:DR259715.1,INSD:BP562500.2,INSD:DR305048.1,
INSD:EL311722.1,INSD:EL226033.1,INSD:ES143580.1,
INSD:BP568052.1,INSD:ES097748.1,INSD:ES001635.1,
INSD:ES034693.1,INSD:ES047746.1,INSD:DR305059.1,
INSD:CB258025.1,INSD:ES063280.1,INSD:EL105418.1,
INSD:DR305049.1,INSD:DR305052.1,INSD:DR305054.1,
INSD:EL025482.1,INSD:CB260650.1,INSD:EL057849.1,
INSD:DR305043.1,INSD:DR305060.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY086674.1,INSD:BT024580.1"
/note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein; FUNCTIONS IN: RNA binding; INVOLVED IN: ribosome
biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: H/ACA ribonucleoprotein complex,
subunit Nhp2, eukaryote (InterPro:IPR002415), Ribosomal
protein L7Ae/L8/Nhp2 family (InterPro:IPR018492),
Ribosomal protein L7Ae/L30e/S12e/Gadd45
(InterPro:IPR004038), Ribosomal protein L7Ae conserved
site (InterPro:IPR004037); BEST Arabidopsis thaliana
protein match is: Ribosomal protein L7Ae/L30e/S12e/Gadd45
family protein (TAIR:AT5G20160.1); Has 1809 Blast hits to
1809 proteins in 413 species: Archae - 342; Bacteria - 16;
Metazoa - 564; Fungi - 259; Plants - 274; Viruses - 0;
Other Eukaryotes - 354 (source: NCBI BLink)."
/db_xref="TAIR:AT4G22380"
/db_xref="Araport:AT4G22380"
intron_pos 77:0 (1/1)
BEGIN
1 MTGEVVNPKA YPLADSQLSI TIMDLVQQAT NYKQLKKGAN EATKTLNRGI SEFVVMAADA
61 EPLEILLHLP LLAEDKNVPY VFVPSKQALG RACGVTRPVI ACSVTSNEAS QLKSQIQHLK
121 DAIEKLLI
//