LOCUS AEE84600.1 385 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SWIB complex BAF60b domain-containing
protein protein.
ACCESSION CP002687-3936
PROTEIN_ID AEE84600.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G22360"
/gene_synonym="T10I14.190"
/gene_synonym="T10I14_190"
/inference="Similar to RNA sequence,
EST:INSD:BP856189.1,INSD:DR223342.1,INSD:EG419790.1,
INSD:BE520191.1,INSD:DR223336.1,INSD:AV826280.1,
INSD:EL201340.1,INSD:EG419814.1,INSD:AV794264.1,
INSD:DR223349.1,INSD:ES010688.1,INSD:EG419807.1,
INSD:EG419759.1,INSD:CF773808.1,INSD:AV795168.1,
INSD:BP835678.1,INSD:EH967238.1,INSD:CK120195.1,
INSD:CK118561.1,INSD:ES111006.1,INSD:BP849176.1,
INSD:EG419770.1,INSD:EL030453.1,INSD:BX835184.1,
INSD:EG419794.1,INSD:EH855118.1,INSD:EG419816.1,
INSD:DR223337.1,INSD:DR293773.1,INSD:DR223333.1,
INSD:DR223350.1,INSD:EL226670.1,INSD:EL329980.1,
INSD:ES038680.1,INSD:BP866984.1,INSD:EH979900.1,
INSD:EG419815.1,INSD:EH815207.1,INSD:EG419796.1,
INSD:ES078075.1,INSD:EH933021.1,INSD:AV546798.1,
INSD:DR223346.1,INSD:DR223341.1,INSD:DR223348.1,
INSD:EL998698.1,INSD:EG419789.1,INSD:EL148733.1,
INSD:ES028550.1,INSD:EL093775.1,INSD:CD533023.1,
INSD:EH963289.1,INSD:ES141594.1,INSD:EL034863.1,
INSD:DR370296.1,INSD:DR223343.1,INSD:DR380060.1,
INSD:DR300876.1,INSD:ES180382.1,INSD:DR371931.1,
INSD:EH971516.1,INSD:ES048861.1,INSD:EL116029.1,
INSD:BP627179.1,INSD:EH938939.1,INSD:EL242747.1,
INSD:ES184513.1,INSD:AV535196.1,INSD:BP830205.1,
INSD:EG419777.1,INSD:ES213570.1,INSD:AV566692.1,
INSD:DR223338.1,INSD:EH821854.1,INSD:DR223334.1,
INSD:EL110704.1,INSD:DR223345.1,INSD:ES161689.1,
INSD:EG419781.1,INSD:BP827879.1,INSD:EG419806.1,
INSD:ES036644.1,INSD:DR223347.1,INSD:EL254154.1,
INSD:BP671470.1,INSD:DR223351.1,INSD:EG419805.1,
INSD:EL973823.1,INSD:DR223335.1,INSD:EG419780.1,
INSD:ES181500.1,INSD:EH804896.1,INSD:BP854900.2,
INSD:EG419798.1,INSD:EL241260.1,INSD:EG419795.1,
INSD:DR223344.1,INSD:EL203201.1,INSD:EG419804.1,
INSD:CK120644.1,INSD:BE520192.1,INSD:DR223340.1,
INSD:DR223339.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX828461.1,INSD:BX828360.1,INSD:AY091266.1,
INSD:BX826831.1,INSD:AY084955.1,INSD:AY059797.1,
INSD:BX827599.1,INSD:BX826743.1,INSD:BX827664.1,
INSD:BX829323.1"
/note="SWIB complex BAF60b domain-containing protein;
CONTAINS InterPro DOMAIN/s: SWIB/MDM2 domain
(InterPro:IPR003121), SWIB domain (InterPro:IPR019835),
DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis
thaliana protein match is: SWIB complex BAF60b
domain-containing protein (TAIR:AT3G19080.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G22360"
/db_xref="Araport:AT4G22360"
intron_pos 183:2 (1/4)
intron_pos 221:0 (2/4)
intron_pos 278:1 (3/4)
intron_pos 346:0 (4/4)
BEGIN
1 MVSDQDLAKG VETLLRQSDP SSLTSLSSIV QQLEAKLGLD LTEKTTFIRD QINILLRAHQ
61 NPSASVASAS SVQQSHPPPP PSSHQQQNLH SGVNVPPMAK GHFTLSHPSQ FSVSSQSQQY
121 PSHFALQPPY HSYDLNFRQP YPVYMPPQQH QHQQQSPRQQ QSSVMLSHGG NASLSVNQAP
181 KESAPAGTKR KGGPGGLNKV CRVSPELEVV VGEPALPRTE IVRQLWAYIR KNNLQDPSNK
241 RKIICDDALR VVFETDCTDM FKMNKLLAKH ILPLDPSKDS GQAKKAKTEV ETKTETTEPI
301 SSTAISSTVT LSEPLGKFFG TGETEMADEE IIRRVWEYIK LNNLEDPVNP MAIQCDEKLR
361 DLLGCESISA VGINEMLRRH MYKQS
//