LOCUS AEE84598.1 510 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin C-terminal hydrolases superfamily
protein protein.
ACCESSION CP002687-3932
PROTEIN_ID AEE84598.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G22350"
/gene_synonym="T10I14.180"
/gene_synonym="T10I14_180"
/inference="Similar to RNA sequence,
EST:INSD:ES012883.1,INSD:BP613994.1,INSD:BP562109.2,
INSD:EL254722.1,INSD:T44427.1,INSD:AV809305.1,
INSD:EL999643.1,INSD:AV549552.1,INSD:EL980462.1,
INSD:EL198461.1,INSD:EL999107.1,INSD:AA395439.1,
INSD:EL989310.1,INSD:AV807023.1,INSD:BP777507.1,
INSD:AI993090.1,INSD:BP618840.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF462856.1,INSD:BT010171.1"
/note="Ubiquitin C-terminal hydrolases superfamily
protein; FUNCTIONS IN: ubiquitin thiolesterase activity,
zinc ion binding; INVOLVED IN: ubiquitin-dependent protein
catabolic process; LOCATED IN: intracellular; EXPRESSED
IN: male gametophyte, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage; CONTAINS
InterPro DOMAIN/s: Zinc finger, C2H2-like
(InterPro:IPR015880), Zinc finger, UBP-type
(InterPro:IPR001607), Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST
Arabidopsis thaliana protein match is: Ubiquitin
C-terminal hydrolases superfamily protein
(TAIR:AT4G22285.1); Has 3525 Blast hits to 3024 proteins
in 211 species: Archae - 0; Bacteria - 0; Metazoa - 2011;
Fungi - 590; Plants - 433; Viruses - 0; Other Eukaryotes -
491 (source: NCBI BLink)."
/db_xref="TAIR:AT4G22350"
/db_xref="Araport:AT4G22350"
intron_pos 35:1 (1/9)
intron_pos 90:0 (2/9)
intron_pos 171:2 (3/9)
intron_pos 200:0 (4/9)
intron_pos 262:0 (5/9)
intron_pos 318:0 (6/9)
intron_pos 364:0 (7/9)
intron_pos 421:1 (8/9)
intron_pos 479:2 (9/9)
BEGIN
1 MKGEREVKNG VSEEEREVKR KRVMERSDSP PPPLVAKGEG NGNKVKGEAQ VEVDDDEDDD
61 DDASKGRGKH SRHVEVRRDC PYLDTVNRQV LDFDFERFCS VSLSNLNVYA CLVCGKYFQG
121 RSQKSHAYTH SLEAGHHVYI NLLTEKVYCL PDSYEINDPS LDDIRHVLNP RFSRAQVNEL
181 DKNRQWSRAL DGSDYLPGMV GLNNIQKTEF VNVTIQSLMR VTPLRNFFLI PENYQHCKSP
241 LGHRFGELTR KIWHARNFKG QVSPHEFLQA VMKASKKRFR IGQQSDPVEF MSWLLNTLHM
301 DLRTSKDASS IIHKCFQGEL EVVKEYQGNE NKEISRMPFL MLGLDLPPPP LFKDVMEKNI
361 IPQVALFDLL KKFDGETVTE VVRPKLARMR YRVIKSPRYL MFHMVRFKKN NFFKEKNPTL
421 VNFPVKDMEL RDYIPSLPRA PEGENVCSKY NLIANIVHDG KPEDGYFRVF VQRKSQELWY
481 EMQDLHVAET LPQMVELSEA YMQIYEQQEE
//