LOCUS AEE84587.1 541 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin C-terminal hydrolases superfamily
protein protein.
ACCESSION CP002687-3920
PROTEIN_ID AEE84587.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G22285"
/inference="Similar to RNA sequence,
EST:INSD:AV791792.1,INSD:ES008183.1,INSD:EH977346.1,
INSD:ES048899.1,INSD:EL986127.1,INSD:ES035908.1,
INSD:AV790774.1,INSD:BP561400.2,INSD:EH872607.1,
INSD:BP789912.1,INSD:EH887287.1,INSD:BP847864.1,
INSD:ES103440.1,INSD:AV825634.1,INSD:EL092299.1,
INSD:BX839356.1,INSD:BP620092.1,INSD:BP787997.1,
INSD:BP848126.1,INSD:EH948352.1,INSD:ES100586.1,
INSD:BP784075.1,INSD:EL097590.1,INSD:DR355542.1,
INSD:EH874910.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000778.1,INSD:AK226555.1"
/note="Ubiquitin C-terminal hydrolases superfamily
protein; FUNCTIONS IN: ubiquitin thiolesterase activity,
zinc ion binding; INVOLVED IN: ubiquitin-dependent protein
catabolic process; LOCATED IN: intracellular; CONTAINS
InterPro DOMAIN/s: Zinc finger, C2H2-like
(InterPro:IPR015880), Zinc finger, UBP-type
(InterPro:IPR001607), Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST
Arabidopsis thaliana protein match is: Ubiquitin
C-terminal hydrolases superfamily protein
(TAIR:AT4G22350.2); Has 3604 Blast hits to 3114 proteins
in 212 species: Archae - 0; Bacteria - 0; Metazoa - 2060;
Fungi - 575; Plants - 445; Viruses - 0; Other Eukaryotes -
524 (source: NCBI BLink)."
/db_xref="TAIR:AT4G22285"
/db_xref="Araport:AT4G22285"
intron_pos 121:0 (1/8)
intron_pos 202:2 (2/8)
intron_pos 231:0 (3/8)
intron_pos 293:0 (4/8)
intron_pos 349:0 (5/8)
intron_pos 395:0 (6/8)
intron_pos 452:1 (7/8)
intron_pos 510:2 (8/8)
BEGIN
1 MKGEREVKNG VSEEEREVKR KRVMERSDSP PPPLGFNNPL LPLANTYDDD DEEEENEQKK
61 SQARGNGVAK GEGNGNKVKG EAQEEVDDDE DDDVSKGKGK HSRHVEVRRD CPYLDTVNRQ
121 VLDFDFERFC SVSLSNLNVY ACLVCGKYFQ GRSQKSHAYT HSLEAGHHVY INLLTEKVYC
181 LPDSYEINDP SLDDIRHVLN PRFSRAQVNE LDKNRQWSRA LDGSDYLPGM VGLNNIQKTE
241 FVNVTIQSLM RVTPLRNFFL IPENYQHCKS PLVHRFGELT RKIWHARNFK GQVSPHEFLQ
301 AVMKASKKRF RIGQQSDPVE FMSWLLNTLH MDLRTSKDAS SIIHKCFQGE LEVVKEFQGN
361 ENKEISRMSF LMLGLDLPPP PLFKDVMEKN IIPQVALFDL LKKFDGETVT EVVRPKLARM
421 RYRVIKSPRY LMFHMVRFKK NNFFKEKNPT LVNFPVKDME LRDYIPSLPR APEGENVCSK
481 YNLIANIVHD GKPEDGYFRV FVQRKSQELW YEMQDLHVAE TLPQMVELSE AYMQIYEQEE
541 E
//