LOCUS AEE84538.1 137 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin-like superfamily protein protein.
ACCESSION CP002687-3860
PROTEIN_ID AEE84538.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="APG8A"
/locus_tag="AT4G21980"
/gene_synonym="ATG8A"
/gene_synonym="AUTOPHAGY 8A"
/gene_synonym="AUTOPHAGY-RELATED 8A"
/gene_synonym="F1N20.80"
/gene_synonym="F1N20_80"
/inference="Similar to RNA sequence,
EST:INSD:BP629945.1,INSD:BP661263.1,INSD:EL168698.1,
INSD:AV532914.1,INSD:EH845823.1,INSD:ES180373.1,
INSD:BP627785.1,INSD:AV806650.1,INSD:ES176087.1,
INSD:DR372804.1,INSD:BP605183.1,INSD:AA598170.1,
INSD:CD531859.1,INSD:EH964443.1,INSD:ES114133.1,
INSD:ES120757.1,INSD:ES012009.1,INSD:AA597440.1,
INSD:EL181714.1,INSD:EH849490.1,INSD:ES143742.1,
INSD:ES099319.1,INSD:ES148973.1,INSD:BP582965.1,
INSD:EL248724.1,INSD:DR349183.1,INSD:EH958540.1,
INSD:EL027538.1,INSD:ES019135.1,INSD:ES094809.1,
INSD:R30077.1,INSD:ES008236.1,INSD:DR375838.1,
INSD:EL192301.1,INSD:EH855893.1,INSD:CD534653.1,
INSD:BP795109.1,INSD:BP624496.1,INSD:AV812155.1,
INSD:AV531241.1,INSD:EL031963.1,INSD:EL053334.1,
INSD:DR376550.1,INSD:BP593805.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF492759.1,INSD:BT006522.1"
/note="AUTOPHAGY 8A (APG8A); FUNCTIONS IN: APG8-specific
protease activity, APG8 activating enzyme activity, Atg8
ligase activity; INVOLVED IN: autophagy; LOCATED IN:
vacuolar lumen, autophagic vacuole, cytoplasm; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3)
(InterPro:IPR004241); BEST Arabidopsis thaliana protein
match is: Ubiquitin-like superfamily protein
(TAIR:AT4G04620.2); Has 1531 Blast hits to 1529 proteins
in 269 species: Archae - 0; Bacteria - 0; Metazoa - 726;
Fungi - 172; Plants - 305; Viruses - 3; Other Eukaryotes -
325 (source: NCBI BLink)."
/db_xref="TAIR:AT4G21980"
/db_xref="Araport:AT4G21980"
intron_pos 28:1 (1/4)
intron_pos 47:0 (2/4)
intron_pos 64:2 (3/4)
intron_pos 104:1 (4/4)
BEGIN
1 MIFACLKFAE TNRIAMAKSS FKISNPLEAR MSESSRIREK YPDRIPVIVE KAGQSDVPDI
61 DKKKYLVPAD LTVGQFVYVV RKRIKLGAEK AIFVFVKNTL PPTAALMSAI YEEHKDEDGF
121 LYMTYSGENT FGSLTVA
//