LOCUS AEE84501.1 472 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pseudouridine synthase family protein protein.
ACCESSION CP002687-3814
PROTEIN_ID AEE84501.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G21770"
/gene_synonym="F17L22.230"
/gene_synonym="F17L22_230"
/inference="Similar to RNA sequence,
EST:INSD:BX836430.1,INSD:EL057926.1,INSD:EL014620.1,
INSD:BP814594.2,INSD:EL220273.1,INSD:BP821120.2,
INSD:DR363899.1,INSD:EL304186.1,INSD:BP789533.1,
INSD:ES072527.1,INSD:ES000645.1,INSD:EL161362.1,
INSD:EH831276.1,INSD:EL208728.1,INSD:EL137979.1,
INSD:EH848799.1,INSD:EL098749.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK226645.1,INSD:AK220972.1,INSD:AY142506.1"
/note="Pseudouridine synthase family protein; FUNCTIONS
IN: pseudouridine synthase activity; INVOLVED IN:
pseudouridine synthesis, RNA modification; LOCATED IN:
chloroplast; CONTAINS InterPro DOMAIN/s: Pseudouridine
synthase, catalytic domain (InterPro:IPR020103),
Pseudouridine synthase, RsuA and RluB/C/D/E/F
(InterPro:IPR006145); Has 5935 Blast hits to 5933 proteins
in 1806 species: Archae - 0; Bacteria - 4596; Metazoa -
112; Fungi - 68; Plants - 78; Viruses - 0; Other
Eukaryotes - 1081 (source: NCBI BLink)."
/db_xref="TAIR:AT4G21770"
/db_xref="Araport:AT4G21770"
intron_pos 72:2 (1/8)
intron_pos 116:2 (2/8)
intron_pos 201:2 (3/8)
intron_pos 229:0 (4/8)
intron_pos 267:2 (5/8)
intron_pos 286:0 (6/8)
intron_pos 323:1 (7/8)
intron_pos 380:0 (8/8)
BEGIN
1 MASPALTGGY RNLTAPVSLL RTLASTRVTT PLFRSNKHSP RFISSPKRFT CLSLLKTDSQ
61 NQTTLSSSSN SGYHEYNRLM PCPAYNLPPR IEHMVVLEDD VLVSEFISKQ LDLPPLYVAD
121 LIRFGAVHYA LVCPKPPPTA TPEEIILFEE VTSPSVLKKR SSIKGKTVRE AQKTFRVTHT
181 NQYAEAGTYL RVHVHPKRSP RCYEIDWKSR IVAVTDSYVI LDKPAGTTVG GTTDNIEESC
241 ATFASRALDL PEPLKTTHQI DNCTEGCVVF ARTKEYCSVF HTKIRNKEVK KLYRALAAAP
301 LPIGIISHYM RPKNMAPRLV AEDSIQGWHL CQLEVLECKK IPWPDAATEK KHDIEDCGWT
361 SKEFAYECTI NLLTGKTHQI RAQLAACGAP LVGDSMYMPA AIAEMGNPDT NPYGKAKKHY
421 TMEENQKETA VAEWIDRHGK EPRVGIGLQA CQISWDDDDG EHFYEAGTPW WR
//