LOCUS AEE84499.1 762 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeobox-leucine zipper family protein
/ lipid-binding START domain-containing protein protein.
ACCESSION CP002687-3811
PROTEIN_ID AEE84499.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ATML1"
/locus_tag="AT4G21750"
/gene_synonym="F17L22.210"
/gene_synonym="F17L22_210"
/gene_synonym="MERISTEM LAYER 1"
/inference="Similar to RNA sequence,
EST:INSD:EH902899.1,INSD:EL131223.1,INSD:DR355665.1,
INSD:EL266254.1,INSD:DR357617.1,INSD:EG493507.1,
INSD:ES149259.1,INSD:EL982484.1,INSD:EL222530.1,
INSD:ES021797.1,INSD:N38357.1,INSD:ES184642.1,
INSD:AV817243.1,INSD:ES002104.1,INSD:DR357618.1,
INSD:DR242905.1,INSD:ES152968.1,INSD:DR371790.1,
INSD:DR357616.1,INSD:ES077196.1,INSD:ES215938.1,
INSD:ES034176.1,INSD:EH842616.1,INSD:EL196874.1,
INSD:EL157319.1,INSD:DR357620.1,INSD:ES041111.1,
INSD:EL218763.1,INSD:BP615464.1,INSD:ES157694.1,
INSD:ES156333.1,INSD:EL016016.1,INSD:ES103346.1,
INSD:ES151131.1,INSD:DR382634.1,INSD:EL028820.1,
INSD:EL267077.1,INSD:EH880146.1,INSD:EL977503.1,
INSD:EH967276.1,INSD:EH944142.1,INSD:BP816803.1,
INSD:EG493440.1,INSD:W43701.1,INSD:ES022805.1,
INSD:EL131679.1,INSD:EL985042.1,INSD:ES127710.1,
INSD:EL082284.1,INSD:ES086628.1,INSD:ES200807.1,
INSD:EH939908.1,INSD:DR357615.1,INSD:ES115311.1,
INSD:ES206221.1,INSD:EH907069.1,INSD:ES105242.1,
INSD:EH882443.1,INSD:ES026276.1,INSD:BP839694.1,
INSD:ES008374.1,INSD:EL089630.1,INSD:EH851108.1,
INSD:AV530206.1,INSD:EL985818.1,INSD:ES031669.1,
INSD:ES069252.1,INSD:EH876746.1,INSD:EH815099.1,
INSD:EL164728.1,INSD:DR357619.1,INSD:EL167026.1,
INSD:ES023490.1,INSD:EL113654.1,INSD:ES027402.1,
INSD:ES137429.1,INSD:EL337850.1,INSD:EL028281.1,
INSD:ES122932.1,INSD:ES129388.1,INSD:ES098518.1,
INSD:EH881745.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY150491.1,INSD:AK229970.1,INSD:BX829120.1"
/note="MERISTEM LAYER 1 (ATML1); FUNCTIONS IN:
sequence-specific DNA binding, DNA binding,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: epidermal cell differentiation,
regulation of transcription, DNA-dependent, cotyledon
development; LOCATED IN: nucleus; EXPRESSED IN: 29 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: Homeobox, conserved site
(InterPro:IPR017970), Homeobox (InterPro:IPR001356),
Homeodomain-like (InterPro:IPR009057), Lipid-binding START
(InterPro:IPR002913), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: protodermal factor 2 (TAIR:AT4G04890.1); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT4G21750"
/db_xref="Araport:AT4G21750"
intron_pos 79:2 (1/8)
intron_pos 119:0 (2/8)
intron_pos 338:0 (3/8)
intron_pos 372:0 (4/8)
intron_pos 439:0 (5/8)
intron_pos 497:1 (6/8)
intron_pos 588:0 (7/8)
intron_pos 620:0 (8/8)
BEGIN
1 MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP
61 NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS LEPLQVKFWF QNKRTQMKAQ
121 HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE
181 EIDRISAIAA KYVGKPLMAN SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF
241 GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT
301 FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG
361 VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG IWAVVDVSLD SLRPSPITRS
421 RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE
481 RLASSMASNI PACDLSVITS PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD
541 VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM
601 AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG
661 DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE GNNLEVVTTT GSCGGSLLTV
721 AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA
//