LOCUS AEE84488.1 967 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana C-terminal domain phosphatase-like 1 protein.
ACCESSION CP002687-3797
PROTEIN_ID AEE84488.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="CPL1"
/locus_tag="AT4G21670"
/gene_synonym="ATCPL1"
/gene_synonym="ATCPL2"
/gene_synonym="C-terminal domain phosphatase-like 1"
/gene_synonym="C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1"
/gene_synonym="F17L22.130"
/gene_synonym="F17L22_130"
/gene_synonym="FIERY 2"
/gene_synonym="FRY2"
/gene_synonym="RCF2"
/gene_synonym="regulators of C-REPEAT BINDING FACTOR (CBF)
gene expression 2"
/gene_synonym="SHI4"
/gene_synonym="SHINY 4"
/inference="Similar to RNA sequence,
EST:INSD:EH811870.1,INSD:EL231395.1,INSD:EL149201.1,
INSD:BP622918.1,INSD:EG527967.1,INSD:EG487006.1,
INSD:ES206659.1,INSD:AU228869.1,INSD:EL298380.1,
INSD:ES166155.1,INSD:AU230254.1,INSD:AV538707.1,
INSD:CB255127.1,INSD:AU237778.1,INSD:EG507131.1,
INSD:ES040737.1,INSD:EH919842.1,INSD:BP818009.1,
INSD:EG508042.1,INSD:EG527965.1,INSD:BP617502.1,
INSD:AV556142.1,INSD:F19791.1,INSD:EH939419.1,
INSD:BP603906.1,INSD:EG479141.1,INSD:EG497039.1,
INSD:EG445903.1,INSD:ES191652.1,INSD:BP617252.1,
INSD:F15563.1,INSD:EG479130.1,INSD:BP610855.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK221944.1,INSD:AK229289.1,INSD:AY557186.1"
/note="C-terminal domain phosphatase-like 1 (CPL1);
FUNCTIONS IN: double-stranded RNA binding, phosphatase
activity, nucleotide phosphatase activity; INVOLVED IN:
abscisic acid mediated signaling pathway, negative
regulation of transcription, response to abiotic stimulus;
LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s:
Double-stranded RNA-binding (InterPro:IPR001159), NLI
interacting factor (InterPro:IPR004274); BEST Arabidopsis
thaliana protein match is: carboxyl-terminal domain (ctd)
phosphatase-like 2 (TAIR:AT5G01270.2); Has 330 Blast hits
to 317 proteins in 105 species: Archae - 0; Bacteria - 31;
Metazoa - 57; Fungi - 81; Plants - 112; Viruses - 1; Other
Eukaryotes - 48 (source: NCBI BLink)."
/db_xref="TAIR:AT4G21670"
/db_xref="Araport:AT4G21670"
intron_pos 107:0 (1/16)
intron_pos 266:0 (2/16)
intron_pos 336:1 (3/16)
intron_pos 389:0 (4/16)
intron_pos 411:2 (5/16)
intron_pos 447:0 (6/16)
intron_pos 475:0 (7/16)
intron_pos 677:0 (8/16)
intron_pos 698:1 (9/16)
intron_pos 742:0 (10/16)
intron_pos 760:0 (11/16)
intron_pos 792:1 (12/16)
intron_pos 864:0 (13/16)
intron_pos 893:0 (14/16)
intron_pos 915:0 (15/16)
intron_pos 939:2 (16/16)
BEGIN
1 MYSNNRVEVF HGDGRLGELE IYPSRELNQQ QDDVMKQRKK KQREVMELAK MGIRISHFSQ
61 SGERCPPLAI LTTISSCGLC FKLEASPSPA QESLSLFYSS CLRDNKTAVM LLGGEELHLV
121 AMYSENIKND RPCFWAFSVA PGIYDSCLVM LNLRCLGIVF DLDETLVVAN TMRSFEDKID
181 GFQRRINNEM DPQRLAVIVA EMKRYQDDKN LLKQYIESDQ VVENGEVIKV QSEIVPALSD
241 NHQPLVRPLI RLQEKNIILT RINPMIRDTS VLVRMRPSWE ELRSYLTAKG RKRFEVYVCT
301 MAERDYALEM WRLLDPEGNL INTNDLLARI VCVKSGFKKS LFNVFLDGTC HPKMALVIDD
361 RLKVWDEKDQ PRVHVVPAFA PYYSPQAEAA ATPVLCVARN VACGVRGGFF RDFDDSLLPR
421 IAEISYENDA EDIPSPPDVS HYLVSEDDTS GLNGNKDPLS FDGMADTEVE RRLKEAISAS
481 SAVLPAANID PRIAAPVQFP MASASSVSVP VPVQVVQQAI QPSAMAFPSI PFQQPQQPTS
541 IAKHLVPSEP SLQSSPAREE GEVPESELDP DTRRRLLILQ HGQDTRDPAP SEPSFPQRPP
601 VQAPPSHVQS RNGWFPVEEE MDPAQIRRAV SKEYPLDSEM IHMEKHRPRH PSFFSKIDNS
661 TQSDRMLHEN RRPPKESLRR DEQLRSNNNL PDSHPFYGED ASWNQSSSRN SDLDFLPERS
721 VSATETSADV LHGIAIKCGA KVEYKPSLVS STDLRFSVEA WLSNQKIGEG IGKSRREALH
781 KAAEASIQNL ADGYMRANGD PGPSHRDATP FTNENISMGN ANALNNQPFA RDETALPVSS
841 RPTDPRLEGS MRHTGSITAL RELCASEGLE MAFQSQRQLP SDMVHRDELH AQVEIDGRVV
901 GEGVGSTWDE ARMQAAERAL SSVRSMLGQP LHKRQGSPRS FGGMSNKRLK PDFQRSLQRM
961 PSSGRYS
//