LOCUS AEE84486.1 584 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana proline-rich spliceosome-associated
(PSP) family protein protein.
ACCESSION CP002687-3794
PROTEIN_ID AEE84486.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G21660"
/gene_synonym="F17L22.120"
/gene_synonym="F17L22_120"
/inference="Similar to RNA sequence,
EST:INSD:AA650900.1,INSD:EL076615.1,INSD:ES003852.1,
INSD:ES003821.1,INSD:AV801021.1,INSD:EL239996.1,
INSD:ES056646.1,INSD:AV799470.1,INSD:AV806056.1,
INSD:DR260615.1,INSD:EG525549.1,INSD:EL186517.1,
INSD:ES176790.1,INSD:BP795654.1,INSD:ES126652.1,
INSD:DR366746.1,INSD:BP612257.1,INSD:EH903618.1,
INSD:BP637697.1,INSD:EG496053.1,INSD:EH811484.1,
INSD:BP818679.1,INSD:EL997991.1,INSD:EL112342.1,
INSD:ES148576.1,INSD:BP837503.1,INSD:EH809475.1,
INSD:BP867855.1,INSD:AV548611.1,INSD:AV782342.1,
INSD:EH819694.1,INSD:ES170527.1,INSD:ES159261.1,
INSD:EG525551.1,INSD:BP628182.1,INSD:ES144335.1,
INSD:ES072582.1,INSD:BX841445.1,INSD:ES016745.1,
INSD:ES197495.1,INSD:ES083544.1,INSD:F19967.1,
INSD:BP829257.1,INSD:BP597633.1,INSD:EG512567.1,
INSD:ES148298.1,INSD:BP843325.1,INSD:ES017661.1,
INSD:EG496045.1,INSD:BP578929.1,INSD:AV821796.1,
INSD:AV796762.1,INSD:ES051783.1,INSD:BP663980.1,
INSD:EH953060.1,INSD:EL333148.1,INSD:EG503299.1,
INSD:EH919823.1,INSD:EL028096.1,INSD:AV810539.1,
INSD:ES041031.1,INSD:EL330642.1,INSD:ES088010.1,
INSD:BP781716.1,INSD:AV830186.1,INSD:BP868725.1,
INSD:EH797727.1,INSD:ES211967.1,INSD:ES018055.1,
INSD:EL030509.1,INSD:EH943474.1,INSD:BP817454.1,
INSD:ES013151.1,INSD:EG512568.1,INSD:DR260614.1,
INSD:ES075138.1,INSD:R30287.1,INSD:ES121013.1,
INSD:EL150748.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT002013.1,INSD:AK220919.1,INSD:BT010557.1"
/note="proline-rich spliceosome-associated (PSP) family
protein; INVOLVED IN: mRNA processing; LOCATED IN:
nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: PSP,
proline-rich (InterPro:IPR006568), Protein of unknown
function DUF382 (InterPro:IPR007180); BEST Arabidopsis
thaliana protein match is: pliceosome associated
protein-related (TAIR:AT1G11520.1); Has 10486 Blast hits
to 6076 proteins in 488 species: Archae - 22; Bacteria -
303; Metazoa - 4991; Fungi - 920; Plants - 455; Viruses -
239; Other Eukaryotes - 3556 (source: NCBI BLink)."
/db_xref="TAIR:AT4G21660"
/db_xref="Araport:AT4G21660"
intron_pos 75:0 (1/14)
intron_pos 159:0 (2/14)
intron_pos 180:0 (3/14)
intron_pos 216:0 (4/14)
intron_pos 242:0 (5/14)
intron_pos 273:0 (6/14)
intron_pos 302:0 (7/14)
intron_pos 336:0 (8/14)
intron_pos 376:0 (9/14)
intron_pos 397:0 (10/14)
intron_pos 444:2 (11/14)
intron_pos 472:0 (12/14)
intron_pos 507:0 (13/14)
intron_pos 561:0 (14/14)
BEGIN
1 MTADSTVALV HSVVSNGDVS NGNTSASSKK SREIDRRRRR RKQKKNNKAS QADVDASDVS
61 AASESKENTD PQPQVCEQIV IEYVPEQAEF EDGFNDEFKE IFEKFNFREP LASEEDGTKD
121 ESEEKEDVKK KVNSDSDSDD DEQDNQNKEK GISNKKKKLQ RRMKIAELKQ VSARPDVVEV
181 WDATSADPKL LVFLKSYRNT VPVPRHWSQK RKYLQGKRGI EKQPFHLPDF IAATGIEKIR
241 QAYIEKEDGK KLKQKQRERM QPKMGKMDID YQVLHDAFFK YQTKPKLSAL GDLYFEGKEF
301 EVKLRETKPG FLSNDLKEAL GMPEGAPPPW LINMQRYGPP PSYPHLKIPG LNAPIPIGAS
361 FGFHAGGWGK PPVDEYGRPL YGDVFGVQQQ DQPNYEEEPI DKSKHWGDLE EEEEEEEEEE
421 EEQEEEMDEE ELEDGTESVD TLSSTPTGIE TPDAIELRKD QRKEPDRALY QVLEEKGESV
481 APGTLLGTSH TYVIKTGTQE KTGAKRVDLL RGQKTDRVDV SLQPEELDAM ENVLPAKYEE
541 AREEEKLRNK PVDLSDMVVE HVQQNSRKRK MHDKEGKKKK DFKF
//