LOCUS AEE84372.1 444 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tubulin beta-9 chain protein.
ACCESSION CP002687-3640
PROTEIN_ID AEE84372.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="TUB9"
/locus_tag="AT4G20890"
/gene_synonym="T13K14.50"
/gene_synonym="T13K14_50"
/gene_synonym="tubulin beta-9 chain"
/inference="Similar to RNA sequence,
EST:INSD:BP598170.1,INSD:DR230656.1,INSD:DR270765.1,
INSD:EH799165.1,INSD:ES161257.1,INSD:CB263748.1,
INSD:EL252165.1,INSD:BP620242.1,INSD:AV561222.1,
INSD:BP827876.1,INSD:EH832889.1,INSD:BP829304.1,
INSD:EL168165.1,INSD:EH881259.1,INSD:BP634984.1,
INSD:EH860445.1,INSD:BP831154.1,INSD:EL255332.1,
INSD:EH991129.1,INSD:EL107558.1,INSD:BP793494.1,
INSD:ES097732.1,INSD:EH874038.1,INSD:EL092446.1,
INSD:R90039.1,INSD:BP851699.1,INSD:EH861717.1,
INSD:AV794292.1,INSD:EL155192.1,INSD:EH865558.1,
INSD:EL244992.1,INSD:EH859891.1,INSD:EG422699.1,
INSD:EL258620.1,INSD:BP785790.1,INSD:BP628955.1,
INSD:EH882264.1,INSD:AV787752.1,INSD:BP610928.1,
INSD:EG422696.1,INSD:BP836638.1,INSD:BP781346.1,
INSD:ES214828.1,INSD:DR270769.1,INSD:EL040273.1,
INSD:ES074972.1,INSD:EH851400.1,INSD:ES081775.1,
INSD:BP589982.1,INSD:EL979417.1,INSD:EH917971.1,
INSD:EL144867.1,INSD:DR270759.1,INSD:EL976067.1,
INSD:EL241266.1,INSD:EL217476.1,INSD:ES100110.1,
INSD:DR270771.1,INSD:DR270770.1,INSD:ES211739.1,
INSD:BP607321.1,INSD:AV797046.1,INSD:AV796223.1,
INSD:DR375840.1,INSD:EL318202.1,INSD:AV827936.1,
INSD:EL132869.1,INSD:EL984124.1,INSD:EL967542.1,
INSD:BP627021.1,INSD:EG422694.1,INSD:BP818869.1,
INSD:BE524350.1,INSD:DR270756.1,INSD:EL239412.1,
INSD:EL206731.1,INSD:AV808821.1,INSD:DR270757.1,
INSD:DR270753.1,INSD:CB252282.1,INSD:AV829836.1,
INSD:DR270772.1,INSD:BP806971.1,INSD:DR270755.1,
INSD:AV800250.1,INSD:DR270762.1,INSD:BP777909.1,
INSD:EL991111.1,INSD:BP808816.1,INSD:ES215417.1,
INSD:ES104079.1,INSD:BP821265.1,INSD:AV790846.1,
INSD:ES211394.1,INSD:EL005545.1,INSD:BP832240.1,
INSD:EL188911.1,INSD:EL131844.1,INSD:ES203863.1,
INSD:EH958166.1,INSD:EH845049.1,INSD:EL978920.1,
INSD:EL311951.1,INSD:EH908600.1,INSD:BP614006.1,
INSD:ES119860.1,INSD:EL259113.1,INSD:BP851228.1,
INSD:ES179560.1,INSD:CK118770.1,INSD:EL174287.1,
INSD:BP589971.1,INSD:EL091542.1,INSD:BP789803.1,
INSD:EL089867.1,INSD:DR270766.1,INSD:BP792119.1,
INSD:AV818452.1,INSD:EL983683.1,INSD:EL191208.1,
INSD:EL226191.1,INSD:BP790066.1,INSD:AV551617.1,
INSD:BP654496.1,INSD:BP624118.1,INSD:BP638315.1,
INSD:BP647049.1,INSD:EH969764.1,INSD:BP651750.1,
INSD:AV782583.1,INSD:AV802029.1,INSD:EH851971.1,
INSD:DR270761.1,INSD:ES099335.1,INSD:DR223515.1,
INSD:EL987172.1,INSD:EL290887.1,INSD:BP630618.1,
INSD:ES081765.1,INSD:ES016284.1,INSD:EL185436.1,
INSD:BP643373.1,INSD:EL294540.1,INSD:ES133189.1,
INSD:EL267658.1,INSD:EL286052.1,INSD:DR270751.1,
INSD:BP659579.1,INSD:EH805188.1,INSD:BP780460.1,
INSD:BP847597.1,INSD:EH888404.1,INSD:BP639156.1,
INSD:EL048112.1,INSD:EL226586.1,INSD:ES061681.1,
INSD:EL101619.1,INSD:AV542146.1,INSD:EL019928.1,
INSD:BP601288.1,INSD:AV539211.1,INSD:BP809563.1,
INSD:DR270767.1,INSD:BP787396.1,INSD:BP622032.1,
INSD:EH838845.1,INSD:ES119413.1,INSD:AV564966.1,
INSD:BP631495.1,INSD:BP668549.1,INSD:BP565295.1,
INSD:DR270760.1,INSD:EL211547.1,INSD:BP590731.1,
INSD:DR270754.1,INSD:EL067400.1,INSD:EL302022.1,
INSD:ES004077.1,INSD:BP593870.1,INSD:EH832374.1,
INSD:BP818589.1,INSD:CD529191.1,INSD:BP826283.1,
INSD:BP646172.1,INSD:DR270768.1,INSD:AI994666.1,
INSD:BP606897.1,INSD:AV831890.1,INSD:BP633999.1,
INSD:EH885047.1,INSD:EH857049.1,INSD:AV818097.1,
INSD:BP793914.1,INSD:BP812227.1,INSD:EL127136.1,
INSD:AV562504.1,INSD:DR270758.1,INSD:BP658124.1,
INSD:EL319598.1,INSD:BP593288.1,INSD:EL189704.1,
INSD:EL990744.1,INSD:DR270764.1,INSD:BP659357.1,
INSD:ES073049.1,INSD:DR270752.1,INSD:ES111372.1,
INSD:AV799948.1,INSD:BP645628.1,INSD:ES027567.1,
INSD:BP633215.1,INSD:BP641245.1,INSD:BP789879.1,
INSD:ES141281.1,INSD:BP794403.1,INSD:ES061493.1,
INSD:BP660306.1,INSD:DR270763.1,INSD:EL114017.1,
INSD:AV804835.1,INSD:EL191717.1,INSD:BP608845.1,
INSD:EL979657.1,INSD:CB263804.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY128337.1,INSD:AY087594.1"
/note="tubulin beta-9 chain (TUB9); FUNCTIONS IN:
structural molecule activity, GTP binding, GTPase
activity; INVOLVED IN: response to cadmium ion; LOCATED
IN: tubulin complex, chloroplast, plasma membrane;
EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin
(InterPro:IPR002453), Tubulin (InterPro:IPR000217),
Tubulin/FtsZ, GTPase domain (InterPro:IPR003008),
Tubulin/FtsZ, N-terminal (InterPro:IPR019746),
Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta
tubulin, autoregulation binding site (InterPro:IPR013838),
Tubulin, conserved site (InterPro:IPR017975),
Tubulin/FtsZ, 2-layer sandwich domain
(InterPro:IPR018316); BEST Arabidopsis thaliana protein
match is: tubulin beta chain 4 (TAIR:AT5G44340.1); Has
23670 Blast hits to 23574 proteins in 4893 species: Archae
- 39; Bacteria - 42; Metazoa - 4465; Fungi - 14215; Plants
- 1550; Viruses - 0; Other Eukaryotes - 3359 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G20890"
/db_xref="Araport:AT4G20890"
intron_pos 132:1 (1/2)
intron_pos 222:1 (2/2)
BEGIN
1 MREILHIQGG QCGNQIGAKF WEVICGEHGI DQTGQSCGDT DLQLERINVY FNEASGGKYV
61 PRAVLMDLEP GTMDSLRSGP FGQIFRPDNF VFGQSGAGNN WAKGHYTEGA ELIDSVLDVV
121 RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMMTFSVF PSPKVSDTVV
181 EPYNATLSVH QLVENADECM VLDNEALYDI CFRTLKLANP TFGDLNHLIS ATMSGVTCCL
241 RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YSALSVPELT QQMWDAKNMM
301 CAADPRHGRY LTASAVFRGK MSTKEVDEQM MNVQNKNSSY FVEWIPNNVK SSVCDIAPTG
361 LKMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVA
421 EYQQYQDATV GEEEYEEDEE EEEA
//