LOCUS AEE84369.1 530 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FAD-binding Berberine family protein protein.
ACCESSION CP002687-3636
PROTEIN_ID AEE84369.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G20860"
/gene_synonym="T13K14.20"
/gene_synonym="T13K14_20"
/inference="Similar to RNA sequence,
EST:INSD:BP574676.1,INSD:BP616950.1,INSD:AV542373.1,
INSD:EL325052.1,INSD:EL234418.1,INSD:EL211301.1,
INSD:EH947252.1,INSD:EL045921.1,INSD:BP608239.1,
INSD:EL273616.1,INSD:BP596702.1,INSD:AV831439.1,
INSD:BE530682.1,INSD:DR332719.1,INSD:AV547780.1,
INSD:BE662929.1,INSD:BP572549.1,INSD:EH949046.1,
INSD:AV540935.1,INSD:Z26512.1,INSD:EH868787.1,
INSD:EL180683.1,INSD:AV797990.1,INSD:Z33920.1,
INSD:BP565983.1,INSD:EH820412.1,INSD:BP574010.1,
INSD:EL013652.1,INSD:EL085846.1,INSD:EL110091.1,
INSD:BP569229.1,INSD:BP619779.1,INSD:F14356.1,
INSD:EH887730.1,INSD:EH845242.1,INSD:EH856091.1,
INSD:EL317839.1,INSD:AV797418.1,INSD:EH837695.1,
INSD:BP664002.1,INSD:EH850843.1,INSD:EL112158.1,
INSD:EH935880.1,INSD:BP796046.1,INSD:DR332720.1,
INSD:EH916991.1,INSD:EL107888.1,INSD:BP806574.1,
INSD:EL072082.1,INSD:BP580255.1,INSD:EL143873.1,
INSD:AV548945.1,INSD:AV811354.1,INSD:AV441261.1,
INSD:EL073406.1,INSD:EL086849.1,INSD:BP579468.1,
INSD:BP604877.1,INSD:BP671221.1,INSD:EL003128.1,
INSD:DR332721.1,INSD:EH811732.1,INSD:EL043396.1,
INSD:BE530006.1,INSD:EL078335.1,INSD:AV557898.1,
INSD:BP809959.1,INSD:AV827164.1,INSD:AV816060.1,
INSD:BP574540.1,INSD:EL256961.1,INSD:AV546998.1,
INSD:AV785238.1,INSD:BE526744.1,INSD:EL309162.1,
INSD:BP807582.1,INSD:EL225522.1,INSD:BP564548.1,
INSD:EL234057.1,INSD:EL042358.1,INSD:BP582314.1,
INSD:BP662475.1,INSD:EL125461.1,INSD:EH979800.1,
INSD:EL272066.1,INSD:EL057666.1,INSD:AA395760.1,
INSD:AV555813.1,INSD:BP564413.1,INSD:EL187472.1,
INSD:BX835362.1,INSD:BP568154.1,INSD:EL324196.1,
INSD:EL282774.1,INSD:N97049.1,INSD:EL259165.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK221267.1,INSD:AY133616.1,INSD:AF367269.1,
INSD:AF083692.1"
/note="FAD-binding Berberine family protein; FUNCTIONS IN:
electron carrier activity, oxidoreductase activity, FAD
binding, catalytic activity; INVOLVED IN: response to
cyclopentenone; LOCATED IN: endomembrane system; EXPRESSED
IN: 10 plant structures; EXPRESSED DURING: LP.06 six
leaves visible, LP.04 four leaves visible, 4 anthesis,
LP.10 ten leaves visible, LP.08 eight leaves visible;
CONTAINS InterPro DOMAIN/s: FAD-binding, type 2
(InterPro:IPR016166), Oxygen oxidoreductase covalent
FAD-binding site (InterPro:IPR006093),
Berberine/berberine-like (InterPro:IPR012951), FAD linked
oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis
thaliana protein match is: FAD-binding Berberine family
protein (TAIR:AT5G44360.1); Has 5055 Blast hits to 4866
proteins in 819 species: Archae - 58; Bacteria - 2286;
Metazoa - 6; Fungi - 1739; Plants - 670; Viruses - 0;
Other Eukaryotes - 296 (source: NCBI BLink)."
/db_xref="TAIR:AT4G20860"
/db_xref="Araport:AT4G20860"
BEGIN
1 MRELFMYLFL LFLVLCVKSV YSTPTREQFQ NCLSTKQFNS TLKNPINLTT HTLDSRVHTD
61 FSESSSPNSS FLNLNFTSLK PILIVKPKSE SEIKQSILCS RKLGVQVRTM SGGHDYEGLS
121 YLSLSPFIIV DLVNLRSISI NLTDETAWIQ SGATLGEVYY KIAKTSKIHA FAAGICPSVG
181 VGGHISGGGF GTIMRKYGLA SDNVVDARLM DVNGKTLDRK TMGEDLFWAL RGGGAASFGV
241 VLSWKVKLAR VPEKVTCFIS QHPMGPSMNK LVHRWQSIGS ELDEDLFIRV IIDNSLEGNQ
301 RKVKSTFQTL FLGGIDRLIP LMNQKFPELG LRSQDCSEMS WIESIMFFNW RSGQPLEILL
361 NRDLRFEDQY FKAKSDYVQK PVPENVFEEV TKRFLEQDTP LMIFEPLGGK ISKISETESP
421 YPHRRGNLYN IQYMVKWKVN EVEEMNKHVR WMRSLHDYMT PYVSKSPRGA YLNYRDLDLG
481 STKGINTSFE DARKWGETYF KGNFKRLGLV KGKIDPTNFF RNEQSIPPLF
//