LOCUS AEE84367.1 539 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FAD-binding Berberine family protein protein.
ACCESSION CP002687-3634
PROTEIN_ID AEE84367.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G20840"
/gene_synonym="F21C20.190"
/gene_synonym="F21C20_190"
/inference="Similar to RNA sequence,
EST:INSD:EH836987.1,INSD:BP563391.1,INSD:DR362231.1,
INSD:BP798702.1,INSD:AV785899.1,INSD:BP620564.1,
INSD:EL205252.1,INSD:EL020915.1,INSD:BP793724.1,
INSD:EL280742.1,INSD:EL078775.1,INSD:EL199825.1,
INSD:BP564428.1,INSD:BP570516.1,INSD:BP577320.1,
INSD:EL297794.1,INSD:AA395057.1,INSD:N37219.1,
INSD:BP799563.1,INSD:EH847089.1,INSD:EL290227.1,
INSD:BP577025.1,INSD:ES207904.1,INSD:BP564137.1,
INSD:EL218870.1,INSD:EL203794.1,INSD:EL028694.1,
INSD:AV547066.1,INSD:BP574681.1,INSD:AV795758.1,
INSD:EL081817.1,INSD:T42451.1,INSD:EL297650.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY062595.1,INSD:BX827154.1"
/note="FAD-binding Berberine family protein; FUNCTIONS IN:
electron carrier activity, oxidoreductase activity, FAD
binding, catalytic activity; LOCATED IN: apoplast, plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s:
FAD-binding, type 2 (InterPro:IPR016166),
Berberine/berberine-like (InterPro:IPR012951), FAD linked
oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis
thaliana protein match is: FAD-binding Berberine family
protein (TAIR:AT4G20830.2); Has 4588 Blast hits to 4445
proteins in 696 species: Archae - 38; Bacteria - 1910;
Metazoa - 4; Fungi - 1681; Plants - 781; Viruses - 0;
Other Eukaryotes - 174 (source: NCBI BLink)."
/db_xref="TAIR:AT4G20840"
/db_xref="Araport:AT4G20840"
BEGIN
1 MIATQTFVSV FFFVFFLVSL PFFSSAAPPS SDSIYESFVQ CFSDKTKSPQ AQITDNVFSR
61 TNPSFSSVLR AYIRNGRFNT SSTPKPAIIV TPRSDIHVSA AVTCSKSLNF LLKIRSGGHD
121 YEGLSYISDK PFFILDMSNL RDVSVDIADQ SAWISAGATL GEVYYRIWEK SKVHGFPAGV
181 CPTVGVGGHI SGGGYGNMLR KFGLSVDNLI DAKIVDVNGQ ILDRKSMGED LFWAISGGGG
241 ASFGVVLGYK VKLVPVPETV TVFRVEKYMD SGAVDMVHKW QSVGPKTDRN LFLRMLIQPV
301 TRKKVKTVRA TVVALFLGRA EEVVALLGKE FPELSLKKEN CSEMTWFQSA LWWDNRVNPT
361 QIDPKVFLDR NLDRANFGKR KSDYVASEIP RDGIESLFKK MTELGKIGLV FNPYGGKMAE
421 VTVNATPFPH RSKLFKIQYS VTWQENSVEI EKGFLNQANV LYSFMTGFVS KNPRNAYLNY
481 RDVDIGVNDH GTNSYEEGEV YGRKYFGDNF DRLVKVKTAA DPDNFFRNEQ SIPTVLSKA
//