LOCUS AEE84310.1 475 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transcription factor TFIIE, alpha
subunit protein.
ACCESSION CP002687-3547
PROTEIN_ID AEE84310.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G20340"
/gene_synonym="F9F13.4"
/gene_synonym="F9F13_4"
/inference="Similar to RNA sequence,
EST:INSD:ES134618.1,INSD:EH915506.1,INSD:EL289637.1,
INSD:ES150761.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY463606.1"
/note="Transcription factor TFIIE, alpha subunit;
FUNCTIONS IN: RNA polymerase II transcription factor
activity, transcription initiation factor activity;
INVOLVED IN: transcription initiation from RNA polymerase
II promoter; LOCATED IN: endomembrane system,
transcription factor TFIIE complex; CONTAINS InterPro
DOMAIN/s: Transcription factor TFIIE, alpha subunit
(InterPro:IPR002853), Transcription factor TFE/TFIIEalpha,
HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana
protein match is: Transcription factor TFIIE, alpha
subunit (TAIR:AT1G03280.1); Has 775 Blast hits to 709
proteins in 197 species: Archae - 3; Bacteria - 16;
Metazoa - 261; Fungi - 178; Plants - 106; Viruses - 31;
Other Eukaryotes - 180 (source: NCBI BLink)."
/db_xref="TAIR:AT4G20340"
/db_xref="Araport:AT4G20340"
intron_pos 19:2 (1/9)
intron_pos 59:2 (2/9)
intron_pos 100:0 (3/9)
intron_pos 138:0 (4/9)
intron_pos 174:2 (5/9)
intron_pos 236:0 (6/9)
intron_pos 301:0 (7/9)
intron_pos 375:0 (8/9)
intron_pos 443:1 (9/9)
BEGIN
1 MDKSITVVRK TVVLEPFVKL VRLLVRIFYD NYTPESDNQQ KSVKNVKGSA VIVLDALTRR
61 QWVREEDLAK EVKRNAKELR KLIRHFEEQK FVMRYHRKET AKRAKMYSYA VGGTTDGRAE
121 DNVKFHTHSY CCLDYAQIYD IVRYKLHRLK KKFKDELEDR NTVQEYGCPN CKRKYNALDA
181 LRLISMEDDS FHCENCNGEL VMECNKLISE EVVDRGDNAR RRQREKVKVW LQDLEGELKP
241 LMELINRVKD LPFPAFEPFP AWEARAAKAA RENGDFNPDD PSRSLGGYGS TPMPFLGETK
301 VEVNLGEGNE DVTSTGGDSS LKMLPPWMIK QGMKLTEEQR GEMRQEANVD GEAAKLSDDK
361 KSVMENGDDN KDLKDEYLKA YYAAIMEQQK LAAKLNEQES AGESTTTDIE SATTYSDRQV
421 GMKSKREEEE EDVEWEEGAS VAANGNYKVD LNVEAEEAEE KEDGDEDDDI DWEEG
//