LOCUS AEE84309.1 286 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transcription initiation factor TFIIE,
beta subunit protein.
ACCESSION CP002687-3545
PROTEIN_ID AEE84309.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G20330"
/gene_synonym="F9F13.2"
/gene_synonym="F9F13_2"
/inference="Similar to RNA sequence,
EST:INSD:ES018666.1,INSD:DR340414.1,INSD:DR340412.1,
INSD:DR340409.1,INSD:BP826902.1,INSD:EH871857.1,
INSD:DR282607.1,INSD:BP568186.1,INSD:EH968602.1,
INSD:DR340411.1,INSD:ES067643.1,INSD:ES138202.1,
INSD:EL189956.1,INSD:T46736.1,INSD:DR282606.1,
INSD:ES196314.1,INSD:AV545696.1,INSD:AV822234.1,
INSD:ES162408.1,INSD:ES120818.1,INSD:ES094231.1,
INSD:EL005919.1,INSD:EH864707.1,INSD:BP639853.1,
INSD:DR340417.1,INSD:DR340408.1,INSD:ES158222.1,
INSD:Z33733.1,INSD:ES187354.1,INSD:ES069352.1,
INSD:BP868923.1,INSD:AI993241.1,INSD:BP670962.1,
INSD:AV813830.1,INSD:EH928883.1,INSD:EH907135.1,
INSD:ES023969.1,INSD:BP659891.1,INSD:DR383928.1,
INSD:EL021909.1,INSD:DR377511.1,INSD:CB257365.1,
INSD:EL225336.1,INSD:DR282608.1,INSD:EH816949.1,
INSD:EL092536.1,INSD:T44730.1,INSD:DR375463.1,
INSD:EL053212.1,INSD:DR340415.1,INSD:DR340413.1,
INSD:EL025371.1,INSD:BP831975.1,INSD:EH846827.1,
INSD:ES120332.1,INSD:ES033511.1,INSD:EL222638.1,
INSD:BP562404.2,INSD:EL179659.1,INSD:DR282609.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY099713.1,INSD:AF385715.1,INSD:AY463608.1,
INSD:AY078018.1"
/note="Transcription initiation factor TFIIE, beta
subunit; FUNCTIONS IN: RNA polymerase II transcription
factor activity; INVOLVED IN: transcription initiation
from RNA polymerase II promoter; LOCATED IN: transcription
factor TFIIE complex; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Transcription initiation factor TFIIE, beta
subunit (InterPro:IPR016656), Transcription factor TFIIE
beta subunit, DNA-binding domain (InterPro:IPR003166);
BEST Arabidopsis thaliana protein match is: Transcription
initiation factor TFIIE, beta subunit (TAIR:AT4G21010.1);
Has 316 Blast hits to 316 proteins in 142 species: Archae
- 0; Bacteria - 0; Metazoa - 124; Fungi - 101; Plants -
70; Viruses - 0; Other Eukaryotes - 21 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G20330"
/db_xref="Araport:AT4G20330"
intron_pos 88:0 (1/3)
intron_pos 132:0 (2/3)
intron_pos 171:0 (3/3)
BEGIN
1 MALKEQLDKF NKQQVKCQST LSSIASSRER TSSSRQNVPL PAAITQKKPD AAPVKFSSDT
61 ERLQNINNIR KAPVGAQIKR VIDLLYERRL ALTPEQINEW CHVDMHANKA VFDSLRKNPK
121 AHYDGRRFSY KATHDVNDKN QLLSLVRKYL DGIAVVDLKD AYPNVMEDLK ALSASGDIYL
181 LSNSQEDIAY PNDFKCEIKV DDEFKALFRD INIPNDMLDV EKELLKIGLK PATNTAERRA
241 AAQTHGISNK PKDKKKKKQE ISKRTKLTNA HLPELFQNLN GSSSRN
//