LOCUS AEE84307.1 277 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ribonuclease H2 subunit B protein.
ACCESSION CP002687-3543
PROTEIN_ID AEE84307.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G20325"
/inference="Similar to RNA sequence,
EST:INSD:BP670962.1,INSD:AV813830.1,INSD:EG501789.1,
INSD:EH928883.1,INSD:EG501782.1,INSD:EG453754.1,
INSD:EG453758.1,INSD:BP659891.1,INSD:ES147023.1,
INSD:EG501781.1,INSD:EH901761.1,INSD:DR383928.1,
INSD:BP568186.1,INSD:ES079842.1,INSD:EG453762.1,
INSD:EG453768.1,INSD:ES059309.1,INSD:DR377511.1,
INSD:ES022514.1,INSD:EL225336.1,INSD:EG453752.1,
INSD:EG453757.1,INSD:DR375463.1,INSD:EG453755.1,
INSD:ES196314.1,INSD:AV545696.1,INSD:EG501794.1,
INSD:ES130583.1,INSD:EG453756.1,INSD:EH846827.1,
INSD:ES089625.1,INSD:EH864707.1,INSD:EG453763.1,
INSD:BP639853.1,INSD:EL044886.1,INSD:EG453767.1,
INSD:EG501783.1,INSD:EG501790.1,INSD:EL259551.1,
INSD:EG501791.1,INSD:EG501784.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: biological_process unknown; LOCATED IN: nucleus;
CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B
(InterPro:IPR019024); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G20325"
/db_xref="Araport:AT4G20325"
intron_pos 20:1 (1/9)
intron_pos 40:1 (2/9)
intron_pos 74:1 (3/9)
intron_pos 100:0 (4/9)
intron_pos 141:1 (5/9)
intron_pos 163:0 (6/9)
intron_pos 186:1 (7/9)
intron_pos 211:2 (8/9)
intron_pos 243:0 (9/9)
BEGIN
1 MSSTVWWEGA EKTRVLIAPD SGCGGNKPGE LLTLRHPKSE NGTCFLFNNE MLQELQWFKQ
61 SYGSWFLGDY ISEDGSLYMA TPVDPVFILL PIFDEARMKK GENSGKFRQL DEILFVEGYP
121 GYQHLLSLAE KCMEIVCQTQ EVGSMKFYRL DNSKVLAWLS CKIYCLKNSL PELDKNYAAQ
181 DEKQTLVDSV SIVGEYLKTE PWLKLLYDHL GLKFVDPTMK ETNMENLPTA NENNMASSNS
241 IQEKANKKPG KQTKQAKVET GSKNIRDMFS RACKKKC
//