LOCUS AEE84228.1 379 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Glycosyl hydrolase family protein
with chitinase insertion domain-containing protein protein.
ACCESSION CP002687-3422
PROTEIN_ID AEE84228.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="ChiC"
/locus_tag="AT4G19810"
/gene_synonym="class V chitinase"
/gene_synonym="T16H5.170"
/gene_synonym="T16H5_170"
/inference="Similar to RNA sequence,
EST:INSD:DR297399.1,INSD:EH861053.1,INSD:AV540689.1,
INSD:BP795228.1,INSD:BP598875.1,INSD:EG513697.1,
INSD:EH942070.1,INSD:Z33802.1,INSD:EG435174.1,
INSD:EG435185.1,INSD:EG513924.1,INSD:DR297398.1,
INSD:EL288087.1,INSD:EH866988.1,INSD:EH929549.1,
INSD:AV545358.1,INSD:EL221556.1,INSD:EL054981.1,
INSD:EL220914.1,INSD:EL313493.1,INSD:Z29184.1,
INSD:EL291522.1,INSD:EL054303.1,INSD:CD529855.1,
INSD:EL192900.1,INSD:EL020991.1,INSD:EL106453.1,
INSD:EH865861.1,INSD:AV807610.1,INSD:DR381027.1,
INSD:AV554101.1,INSD:EG513679.1,INSD:AU226434.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT029539.1,INSD:BX828024.1"
/note="Glycosyl hydrolase family protein with chitinase
insertion domain; FUNCTIONS IN: cation binding, chitinase
activity, hydrolase activity, hydrolyzing O-glycosyl
compounds, catalytic activity; INVOLVED IN: carbohydrate
metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, C globular stage; CONTAINS InterPro
DOMAIN/s: Glycoside hydrolase, family 18, catalytic domain
(InterPro:IPR001223), Chitinase II (InterPro:IPR011583),
Glycoside hydrolase, catalytic core (InterPro:IPR017853),
Glycoside hydrolase, subgroup, catalytic core
(InterPro:IPR013781); BEST Arabidopsis thaliana protein
match is: Glycosyl hydrolase family protein with chitinase
insertion domain (TAIR:AT4G19820.1); Has 6461 Blast hits
to 6286 proteins in 1137 species: Archae - 29; Bacteria -
2687; Metazoa - 1798; Fungi - 1311; Plants - 165; Viruses
- 109; Other Eukaryotes - 362 (source: NCBI BLink)."
/db_xref="TAIR:AT4G19810"
/db_xref="Araport:AT4G19810"
intron_pos 232:1 (1/2)
intron_pos 362:1 (2/2)
BEGIN
1 MSSTKLISLI VSITFFLTLQ CSMAQTVVKA SYWFPASEFP VTDIDSSLFT HLFCAFADLN
61 SQTNQVTVSS ANQPKFSTFT QTVQRRNPSV KTLLSIGGGI ADKTAYASMA SNPTSRKSFI
121 DSSIRVARSY GFHGLDLDWE YPSSATEMTN FGTLLREWRS AVVAEASSSG KPRLLLAAAV
181 FYSNNYYSVL YPVSAVASSL DWVNLMAYDF YGPGWSRVTG PPAALFDPSN AGPSGDAGTR
241 SWIQAGLPAK KAVLGFPYYG YAWRLTNANS HSYYAPTTGA AISPDGSIGY GQIRKFIVDN
301 GATTVYNSTV VGDYCYAGTN WIGYDDNQSI VTKVRYAKQR GLLGYFSWHV GADDNSGLSR
361 AASQAWDATT ATTRTIQKV
//