LOCUS AEE84157.1 595 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc knuckle (CCHC-type) family protein
protein.
ACCESSION CP002687-3313
PROTEIN_ID AEE84157.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G19190"
/gene_synonym="T18B16.160"
/gene_synonym="T18B16_160"
/inference="Similar to RNA sequence,
EST:INSD:EG511516.1,INSD:AV828250.1,INSD:AV800846.1,
INSD:BX834544.1,INSD:BP857623.1,INSD:BP828596.1,
INSD:ES046538.1,INSD:BP649009.1,INSD:BP813823.1,
INSD:EL096583.1,INSD:EL053258.1,INSD:BP835346.1,
INSD:BP819677.1,INSD:ES123806.1,INSD:BX837652.1,
INSD:BP650058.1,INSD:AV440691.1,INSD:AA605319.1,
INSD:AA395201.1,INSD:BP825236.1,INSD:EG511518.1,
INSD:EL322429.1,INSD:EL147860.1,INSD:EG511521.1,
INSD:N96066.1,INSD:BP833876.1,INSD:BP806647.1,
INSD:BP796498.1,INSD:EH888198.1,INSD:ES191361.1,
INSD:BP639354.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK229939.1,INSD:AY133757.1,INSD:AK176041.1,
INSD:AK222181.1,INSD:AK222139.1,INSD:AY065216.1"
/note="zinc knuckle (CCHC-type) family protein; FUNCTIONS
IN: zinc ion binding, nucleic acid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; CONTAINS InterPro DOMAIN/s: CBF1-interacting
co-repressor CIR, N-terminal (InterPro:IPR019339), Zinc
finger, CCHC-type (InterPro:IPR001878); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G19190"
/db_xref="Araport:AT4G19190"
intron_pos 80:0 (1/6)
intron_pos 101:0 (2/6)
intron_pos 151:2 (3/6)
intron_pos 192:2 (4/6)
intron_pos 260:0 (5/6)
intron_pos 298:1 (6/6)
BEGIN
1 MDGEGEGSGI RLSKRFAGGK VTGGSLEVDY KTKSGTAWSH SFLNQKPWHP LSYPNQRRKW
61 IAEQTHAQHD RRAEEVAREF AQEQEFFKQA ALISKKEREK IETMKAVSFM YVRPPGYDPE
121 SAKAAEYKDE KHKGQGSSTQ DPVADDNVGS RPEESQGGGE RTQERKKPRP KDVFGRALPT
181 EEEFEVLKNA PRMETGIPGR VKPFAVEVRN VKCLRCGNFG HQSGDRDCPL KDAVMPNEEL
241 RLKRDDPLTA IIAHTDPSEP LKWELKQKPG LSPPRGGFDP DDPNQQIVAE DIFDEYGGFL
301 EGSIPIEILK SMSSDKKRKS KKNKRHKKHS SRTVEETDES STGSEDSREK RGSKKRKKLK
361 KKSKKQYDSD SLSFEGSGSD SYRLSRRRHT KHVDPSASLK SEVYHQGNSH REKHYYDEKH
421 QKRKEIVDRP SASSDDSDYY RSNSSRKKRS EDDYKSHHRE RKQVHSNDPV SEKSQKQHYS
481 ESGKIQRVEK EHRYDERRHR YVDMESENRN RSEKKPRYDD RDSEKHHRSV KGKEKHVYEA
541 SDDPEEFSDR YRSTKKTESD SESNRRSRKK KHELSSEEEE GESRKHRYST NRRRN
//