LOCUS AEE84147.1 784 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Replication factor-A protein 1-like
protein protein.
ACCESSION CP002687-3299
PROTEIN_ID AEE84147.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G19130"
/gene_synonym="Replication Protein A 1E"
/gene_synonym="RPA1E"
/gene_synonym="T18B16.100"
/gene_synonym="T18B16_100"
/inference="Similar to RNA sequence, EST:INSD:AV815274.1"
/inference="Similar to RNA sequence, mRNA:INSD:AF439837.1"
/note="Replication factor-A protein 1-related; FUNCTIONS
IN: DNA binding, zinc ion binding, nucleic acid binding;
INVOLVED IN: DNA replication; LOCATED IN: nucleus;
EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Replication factor-a protein 1 Rpa1
(InterPro:IPR004591), Nucleic acid-binding, OB-fold
(InterPro:IPR012340), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Nucleic acid binding, OB-fold,
tRNA/helicase-type (InterPro:IPR004365), Replication
factor A, C-terminal (InterPro:IPR013955), Zinc finger,
CCHC-type (InterPro:IPR001878), Replication factor-A
protein 1, N-terminal (InterPro:IPR007199); BEST
Arabidopsis thaliana protein match is: Replication
factor-A protein 1-related (TAIR:AT5G45400.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT4G19130"
/db_xref="Araport:AT4G19130"
intron_pos 95:2 (1/1)
BEGIN
1 MEVSLTAGAI GKIMNGEVTT EADMIPVLQV TDLKQIMAQQ DPTRERFRMV LSDGTYLHQG
61 MLGTDLNNLV KEGTLQPGSI VRLTRFVGDV IKGRRIVIVP QLEVLKQISD IIGHPVPGGK
121 HNDQRGADSG IKFNTTEQQG SGIRQVNNIE PGRSNAAISP QVGGTGSSVP ASTTPSTRAY
181 SNPSSGNGVT RQDYARDPPT SYPHQPQPPP PMYANRGPVA RNEAPPKIIP VNALSPYSGR
241 WTIKARVTNK AALKQYSNPR GEGKVFNFDL LDADGGEIRV TCFNAVADQF YDQIVVGNLY
301 LISRGSLRPA QKNFNHLRND YEIMLDNAST IKQCYEEDAA IPRHQFHFRT IGDIESMENN
361 CIVDVIGIVS SISPTVTITR KNGTATPKRS LQLKDMSGRS VEVTMWGDFC NAEGQRLQSL
421 CDSGVFPVLA VKAGRISEFN GKTVSTIGSS QLFIDPDFVE AEKLKNWFER EGKSVPCISL
481 SREFSGSGKV DVRKTISQIK DEKLGTSEKP DWITVSATIL YLKFDNFCYT ACPIMNGDRP
541 CSKKVTDNGD GTWRCEKCDK SVDECDYRYI LQLQIQDHTD LTCVTAFQEA GEEIMGISAK
601 DLYYVKNEHK DEEKFEDIIR KVAFTKYNFK LKVKEETFSD EQRVKATVVK VDKLNYSADT
661 RTMLGAMDKL RTRDANSLPI NPEGSDYNAD VVNTGIGSSG TRDPSSVQRR DFGLHAHQSG
721 QSGNHYSGGG ATTSCNVCGN SGHVSAKCPG ATKPQEQGQY MGGSYRGTTG SYGGGLPRQH
781 VGSY
//