LOCUS AEE84104.1 494 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily
protein protein.
ACCESSION CP002687-3241
PROTEIN_ID AEE84104.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G18905"
/inference="Similar to RNA sequence,
EST:INSD:CB258433.1,INSD:EL304061.1,INSD:EH823818.1,
INSD:AV828754.1,INSD:EL061069.1,INSD:AV802676.1,
INSD:CF774439.1,INSD:EL331335.1,INSD:CB257682.1,
INSD:ES064263.1,INSD:DR361374.1,INSD:ES048522.1,
INSD:AV816972.1,INSD:AV825399.1,INSD:DR361373.1,
INSD:BP621869.1,INSD:AV791192.1,INSD:BP629803.1,
INSD:ES099882.1,INSD:BE525031.1,INSD:CB258439.1,
INSD:EG459560.1,INSD:EH901898.1,INSD:ES121190.1,
INSD:ES119672.1,INSD:AV816300.1,INSD:DR361372.1,
INSD:ES132259.1,INSD:EL309461.1,INSD:ES150371.1,
INSD:ES040164.1,INSD:ES047981.1,INSD:DR361371.1,
INSD:DR381436.1,INSD:EG473308.1,INSD:EL179243.1,
INSD:EG459561.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827439.1,INSD:AY050883.1,INSD:AY113942.1,
INSD:AY056430.1"
/note="Transducin/WD40 repeat-like superfamily protein;
CONTAINS InterPro DOMAIN/s: WD40 repeat 2
(InterPro:IPR019782), WD40 repeat, conserved site
(InterPro:IPR019775), WD40 repeat (InterPro:IPR001680),
G-protein beta WD-40 repeat, region (InterPro:IPR020472),
WD40 repeat-like-containing domain (InterPro:IPR011046),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat, subgroup
(InterPro:IPR019781); BEST Arabidopsis thaliana protein
match is: Transducin/WD40 repeat-like superfamily protein
(TAIR:AT4G18900.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G18905"
/db_xref="Araport:AT4G18905"
intron_pos 40:2 (1/14)
intron_pos 108:1 (2/14)
intron_pos 135:0 (3/14)
intron_pos 168:0 (4/14)
intron_pos 208:1 (5/14)
intron_pos 229:0 (6/14)
intron_pos 258:0 (7/14)
intron_pos 278:2 (8/14)
intron_pos 311:0 (9/14)
intron_pos 336:0 (10/14)
intron_pos 369:0 (11/14)
intron_pos 419:0 (12/14)
intron_pos 450:0 (13/14)
intron_pos 476:0 (14/14)
BEGIN
1 MITAVSWIPK GNLKAVPDVA EPPSKEELKE LIESGAFARN VEGSNEDEEE EIEEDGEEIS
61 EVDHAKAVAE ALGKSSKSKA VSSSMEVDEV SQGLKELDMD NYDEEDDEIE LFSSGMGDLY
121 YPSNEMDPYL KDVDDEDDEE DIDDTTVKPT DSVIICARNE DDVSHLEVYL YEESSGSPNM
181 YVHHHIIIPE FPLCTAWLDC PLKGGEKGNF VAIGSKDTPT IEIWDLDVRD EVLPCIQLGG
241 IEEMIVSKKK KSKKQKPKFK EGSHTESVLG LAWNKEFRNI LASASADKKV KVWDVATGTC
301 KITMEHHTKE VQAVAWNHYA PEVLLSGSFD QTVVMKDGRQ PSHSGFKWSV MSDVESLAWD
361 PHCEHSFVVS LEDGTVKGFD IRAAQSGSDS DLNPTYTIQA HAQDRGVSSI SYNISTPNLL
421 ATGSMDKSVK LWDLSNNEPS CIATHQPNAG AVFSISFAVD NPFLLAIGGS KGELHVWDTL
481 LDANVARKYG SNRS
//