LOCUS AEE84061.1 642 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002687-3187
PROTEIN_ID AEE84061.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G18570"
/gene_synonym="F28J12.8"
/inference="Similar to RNA sequence,
EST:INSD:EL214670.1,INSD:EL135347.1,INSD:ES136608.1,
INSD:BX834346.1,INSD:EH835631.1,INSD:ES128257.1,
INSD:EL006768.1,INSD:ES043069.1,INSD:EG500432.1,
INSD:BP832578.1,INSD:BX837308.1,INSD:ES201409.1,
INSD:DR369796.1,INSD:ES132926.1,INSD:BP827278.1,
INSD:ES188960.1,INSD:AV558009.1,INSD:EH828989.1,
INSD:EL189835.1,INSD:BP832332.1,INSD:EH893166.1,
INSD:AV826833.1,INSD:EL039979.1,INSD:BP612316.1,
INSD:ES160146.1,INSD:EL174068.1,INSD:BP816495.1,
INSD:BP601593.1,INSD:AV556115.1,INSD:ES189176.1,
INSD:AI138148.1,INSD:ES203684.1,INSD:ES202619.1,
INSD:AV555492.1,INSD:ES204148.1,INSD:ES078546.1,
INSD:BX834953.1,INSD:ES124539.1,INSD:BP824635.1,
INSD:ES143586.1,INSD:DR369797.1,INSD:DR374835.1,
INSD:AV523042.1,INSD:ES023489.1,INSD:BX838147.1,
INSD:BP830499.1,INSD:BP609052.1,INSD:AV442773.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY128285.1,INSD:BT004523.1,INSD:BX826449.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; BEST Arabidopsis thaliana protein match is:
Hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G25690.3); Has 41355 Blast hits to 22856 proteins
in 1198 species: Archae - 106; Bacteria - 4898; Metazoa -
15706; Fungi - 4501; Plants - 9175; Viruses - 1532; Other
Eukaryotes - 5437 (source: NCBI BLink)."
/db_xref="TAIR:AT4G18570"
/db_xref="Araport:AT4G18570"
intron_pos 412:0 (1/5)
intron_pos 456:0 (2/5)
intron_pos 516:2 (3/5)
intron_pos 554:0 (4/5)
intron_pos 600:0 (5/5)
BEGIN
1 MVAGKVRVTM GFHKSPSTKK TKDMPSPLPL PPPPPPPLKP PSSGSATTKP PINPSKPGFT
61 RSFGVYFPRA SAQVHATAAA ASHNGVVSEL RRQVEELRER EALLKTENLE VKLLRESVSV
121 IPLLESQIAD KNGEIDELRK ETARLAEDNE RLRREFDRSE EMRRECETRE KEMEAEIVEL
181 RKLVSSESDD HALSVSQRFQ GLMDVSAKSN LIRSLKRVGS LRNLPEPITN QENTNKSISS
241 SGDADGDIYR KDEIESYSRS SNSEELTESS SLSTVRSRVP RVPKPPPKRS ISLGDSTENR
301 ADPPPQKSIP PPPPPPPPPL LQQPPPPPSV SKAPPPPPPP PPPKSLSIAS AKVRRVPEVV
361 EFYHSLMRRD STNSRRDSTG GGNAAAEAIL ANSNARDMIG EIENRSVYLL AIKTDVETQG
421 DFIRFLIKEV GNAAFSDIED VVPFVKWLDD ELSYLVDERA VLKHFEWPEQ KADALREAAF
481 CYFDLKKLIS EASRFREDPR QSSSSALKKM QALFEKLEHG VYSLSRMRES AATKFKSFQI
541 PVDWMLETGI TSQIKLASVK LAMKYMKRVS AELEAIEGGG PEEEELIVQG VRFAFRVHQF
601 AGGFDAETMK AFEELRDKAR SCHVQCQSQT HQHKLCFRST PC
//