LOCUS AEE84000.1 1112 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phytochrome E protein.
ACCESSION CP002687-3099
PROTEIN_ID AEE84000.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="PHYE"
/locus_tag="AT4G18130"
/gene_synonym="F15J5.100"
/gene_synonym="F15J5_100"
/gene_synonym="phytochrome E"
/gene_synonym="PHYTOCHROME E"
/inference="Similar to RNA sequence,
EST:INSD:BP591073.1,INSD:EL246934.1,INSD:ES172778.1,
INSD:CB260653.1,INSD:W43784.1,INSD:ES068509.1,
INSD:AU227226.1,INSD:ES047396.1,INSD:AV555397.1,
INSD:EH956162.1,INSD:ES066973.1,INSD:CK117617.1,
INSD:T21020.1,INSD:AI998063.1,INSD:BP796488.1,
INSD:ES039290.1,INSD:BP602248.1,INSD:EH955322.1,
INSD:BP663447.1,INSD:EL097006.1,INSD:EG520938.1,
INSD:ES215013.1,INSD:ES042428.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK221424.1"
/note="phytochrome E (PHYE); FUNCTIONS IN: protein
histidine kinase activity, G-protein coupled photoreceptor
activity, signal transducer activity; INVOLVED IN: in 8
processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Phytochrome, central region
(InterPro:IPR013515), Signal transduction histidine
kinase, core (InterPro:IPR005467), PAS fold
(InterPro:IPR013767), PAS (InterPro:IPR000014),
Phytochrome chromophore attachment domain
(InterPro:IPR016132), ATPase-like, ATP-binding domain
(InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654),
Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome
(InterPro:IPR001294), Signal transduction histidine
kinase, subgroup 1, dimerisation/phosphoacceptor domain
(InterPro:IPR003661), Phytochrome chromophore binding site
(InterPro:IPR013516), GAF (InterPro:IPR003018); BEST
Arabidopsis thaliana protein match is: phytochrome B
(TAIR:AT2G18790.1); Has 25391 Blast hits to 25044 proteins
in 3724 species: Archae - 289; Bacteria - 19481; Metazoa -
8; Fungi - 476; Plants - 4006; Viruses - 9; Other
Eukaryotes - 1122 (source: NCBI BLink)."
/db_xref="TAIR:AT4G18130"
/db_xref="Araport:AT4G18130"
intron_pos 665:1 (1/3)
intron_pos 934:2 (2/3)
intron_pos 1032:2 (3/3)
BEGIN
1 MGFESSSSAA SNMKPQPQKS NTAQYSVDAA LFADFAQSIY TGKSFNYSKS VISPPNHVPD
61 EHITAYLSNI QRGGLVQPFG CLIAVEEPSF RILGLSDNSS DFLGLLSLPS TSHSGEFDKV
121 KGLIGIDART LFTPSSGASL SKAASFTEIS LLNPVLVHSR TTQKPFYAIL HRIDAGIVMD
181 LEPAKSGDPA LTLAGAVQSQ KLAVRAISRL QSLPGGDIGA LCDTVVEDVQ RLTGYDRVMV
241 YQFHEDDHGE VVSEIRRSDL EPYLGLHYPA TDIPQAARFL FKQNRVRMIC DCNATPVKVV
301 QSEELKRPLC LVNSTLRAPH GCHTQYMANM GSVASLALAI VVKGKDSSKL WGLVVGHHCS
361 PRYVPFPLRY ACEFLMQAFG LQLQMELQLA SQLAEKKAMR TQTLLCDMLL RDTVSAIVTQ
421 SPGIMDLVKC DGAALYYKGK CWLVGVTPNE SQVKDLVNWL VENHGDDSTG LTTDSLVDAG
481 YPGAISLGDA VCGVAAAGFS SKDYLLWFRS NTASAIKWGG AKHHPKDKDD AGRMHPRSSF
541 TAFLEVAKSR SLPWEISEID AIHSLRLIMR ESFTSSRPVL SGNGVARDAN ELTSFVCEMV
601 RVIETATAPI FGVDSSGCIN GWNKKTAEMT GLLASEAMGK SLADEIVQEE SRAALESLLC
661 KALQGEEEKS VMLKLRKFGQ NNHPDYSSDV CVLVNSCTSR DYTENIIGVC FVGQDITSEK
721 AITDRFIRLQ GDYKTIVQSL NPLIPPIFAS DENACCSEWN AAMEKLTGWS KHEVIGKMLP
781 GEVFGVFCKV KCQDSLTKFL ISLYQGIAGD NVPESSLVEF FNKEGKYIEA SLTANKSTNI
841 EGKVIRCFFF LQIINKESGL SCPELKESAQ SLNELTYVRQ EIKNPLNGIR FAHKLLESSE
901 ISASQRQFLE TSDACEKQIT TIIESTDLKS IEEGKLQLET EEFRLENILD TIISQVMIIL
961 RERNSQLRVE VAEEIKTLPL NGDRVKLQLI LADLLRNIVN HAPFPNSWVG ISISPGQELS
1021 RDNGRYIHLQ FRMIHPGKGL PSEMLSDMFE TRDGWVTPDG LGLKLSRKLL EQMNGRVSYV
1081 REDERCFFQV DLQVKTMLGV ESRGTEGSSS IK
//