LOCUS AEE83961.1 413 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ARF-GAP domain 8 protein.
ACCESSION CP002687-3050
PROTEIN_ID AEE83961.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="AGD8"
/locus_tag="AT4G17890"
/gene_synonym="ARF-GAP domain 8"
/gene_synonym="T6K21.1"
/inference="Similar to RNA sequence,
EST:INSD:AV827663.1,INSD:EL112587.1,INSD:DR310823.1,
INSD:BE522868.1,INSD:DR310840.1,INSD:EL101781.1,
INSD:AU239912.1,INSD:AV818244.1,INSD:DR310828.1,
INSD:DR310831.1,INSD:DR310815.1,INSD:EH920737.1,
INSD:EH963079.1,INSD:AV798919.1,INSD:ES048313.1,
INSD:DR310820.1,INSD:ES069175.1,INSD:EL255858.1,
INSD:BP789973.1,INSD:DR310818.1,INSD:DR310811.1,
INSD:EL257898.1,INSD:DR310812.1,INSD:ES169329.1,
INSD:EL089250.1,INSD:BE522808.1,INSD:BP779976.1,
INSD:DR310832.1,INSD:DR310837.1,INSD:ES006470.1,
INSD:EL315285.1,INSD:DR310834.1,INSD:ES112008.1,
INSD:EL228685.1,INSD:EL023425.1,INSD:EH948236.1,
INSD:DR310830.1,INSD:BP804190.1,INSD:DR310827.1,
INSD:EL197827.1,INSD:EH848866.1,INSD:EL099473.1,
INSD:CD533233.1,INSD:EL192313.1,INSD:EL065798.1,
INSD:DR310824.1,INSD:DR310809.1,INSD:DR310813.1,
INSD:EL008086.1,INSD:AV819084.1,INSD:DR310814.1,
INSD:EL057893.1,INSD:EL059360.1,INSD:DR310836.1,
INSD:EH964188.1,INSD:DR310821.1,INSD:BP802076.1,
INSD:EL188331.1,INSD:DR310817.1,INSD:DR310839.1,
INSD:BP783334.1,INSD:BP577311.1,INSD:BE523788.1,
INSD:DR310816.1,INSD:EL200698.1,INSD:EG524115.1,
INSD:DR310810.1,INSD:DR310835.1,INSD:BP858031.2,
INSD:BP562607.2,INSD:DR310826.1,INSD:EL165603.1,
INSD:DR310825.1,INSD:DR310838.1,INSD:EL095038.1,
INSD:BP850992.1,INSD:EH843450.1,INSD:BP795316.1,
INSD:DR310829.1,INSD:EH812420.1,INSD:BP629429.1,
INSD:BP633983.1,INSD:ES130587.1,INSD:BP787904.1,
INSD:BP864014.1,INSD:DR310822.1,INSD:DR310819.1,
INSD:EL235860.1,INSD:BE525974.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK175252.1,INSD:AF360177.1,INSD:AK221371.1,
INSD:BX827597.1,INSD:AK229721.1,INSD:BT000968.1,
INSD:AK176618.1,INSD:AK176287.1,INSD:AK221239.1,
INSD:BX827160.1,INSD:BX841546.1"
/note="ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase
activator activity, DNA binding, zinc ion binding;
INVOLVED IN: regulation of ARF GTPase activity; LOCATED
IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf
GTPase activating protein (InterPro:IPR001164); BEST
Arabidopsis thaliana protein match is: ARF-GAP domain 9
(TAIR:AT5G46750.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17890"
/db_xref="Araport:AT4G17890"
intron_pos 27:0 (1/6)
intron_pos 66:2 (2/6)
intron_pos 211:0 (3/6)
intron_pos 303:0 (4/6)
intron_pos 345:0 (5/6)
intron_pos 379:0 (6/6)
BEGIN
1 MASSSADNLT DKNIVFRKLK SKSENKVCFD CSAKNPTWAS VTYGIFLCID CSATHRNLGV
61 HISFVRSTNL DSWSPEQLRT MMFGGNNRAQ VFFKQHGWTD GGKIEAKYTS RAADLYRQIL
121 AKEVAKAIAE ETNSGLLSSP VATSQLPEVS NGVSSYSVKE ELPLSKHEAT SATSSPKASN
181 TVVPSTFKKP IGAKRTGKTG GLGARKLTTK PKDNLYEQKP EEVAPVIPAV SSTNNGESKS
241 SAGSSFASRF EYNDDLQSGG QSVGGTQVLN HVAPPKSSSF FSDFGMDSSF PKKSSSNSSK
301 SQVEESDEAR KKFTNAKSIS SAQYFGDQNK NADLESKATL QKFAGSASIS SADFYGHDQD
361 DSNIDITASD LINRLSFQAQ QDLSSLVNIA GETKKKLGTL ASGIFSDIQD RML
//