LOCUS AEE83960.1 589 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Basic helix-loop-helix (bHLH) DNA-
binding family protein protein.
ACCESSION CP002687-3049
PROTEIN_ID AEE83960.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="MYC4"
/locus_tag="AT4G17880"
/gene_synonym="T6K21.60"
/gene_synonym="T6K21_60"
/inference="Similar to RNA sequence,
EST:INSD:EG514291.1,INSD:ES069866.1,INSD:EG477527.1,
INSD:DR749637.1,INSD:N96724.1,INSD:EL101871.1,
INSD:BP793767.1,INSD:EL254568.1,INSD:BP787530.1,
INSD:ES050981.1,INSD:ES048670.1,INSD:EG512274.1,
INSD:AV441753.1,INSD:ES144772.1,INSD:EL240988.1,
INSD:ES112493.1,INSD:EL002733.1,INSD:EL991489.1,
INSD:DR354636.1,INSD:EL082883.1,INSD:ES097911.1,
INSD:EL171709.1,INSD:BX840722.1,INSD:DR354637.1,
INSD:EG514079.1,INSD:ES096557.1,INSD:BP796760.1,
INSD:ES096993.1,INSD:ES123428.1,INSD:BP792155.1,
INSD:ES006352.1,INSD:EG514345.1,INSD:ES188518.1,
INSD:EL143651.1,INSD:EG513787.1,INSD:ES149550.1,
INSD:EH826738.1,INSD:DR751151.1,INSD:EG512277.1,
INSD:EL243510.1,INSD:DR354635.1,INSD:EL341223.1,
INSD:ES030695.1,INSD:DR751152.1,INSD:ES172401.1,
INSD:DR749636.1,INSD:ES122206.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX829277.1,INSD:AF251689.1,INSD:AK221507.1"
/note="Basic helix-loop-helix (bHLH) DNA-binding family
protein; FUNCTIONS IN: DNA binding, sequence-specific DNA
binding transcription factor activity; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Helix-loop-helix DNA-binding domain (InterPro:IPR001092),
Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST
Arabidopsis thaliana protein match is: Basic
helix-loop-helix (bHLH) DNA-binding family protein
(TAIR:AT5G46760.1); Has 4061 Blast hits to 3773 proteins
in 423 species: Archae - 0; Bacteria - 20; Metazoa - 552;
Fungi - 119; Plants - 3303; Viruses - 13; Other Eukaryotes
- 54 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17880"
/db_xref="Araport:AT4G17880"
BEGIN
1 MSPTNVQVTD YHLNQSKTDT TNLWSTDDDA SVMEAFIGGG SDHSSLFPPL PPPPLPQVNE
61 DNLQQRLQAL IEGANENWTY AVFWQSSHGF AGEDNNNNNT VLLGWGDGYY KGEEEKSRKK
121 KSNPASAAEQ EHRKRVIREL NSLISGGVGG GDEAGDEEVT DTEWFFLVSM TQSFVKGTGL
181 PGQAFSNSDT IWLSGSNALA GSSCERARQG QIYGLQTMVC VATENGVVEL GSSEIIHQSS
241 DLVDKVDTFF NFNNGGGEFG SWAFNLNPDQ GENDPGLWIS EPNGVDSGLV AAPVMNNGGN
301 DSTSNSDSQP ISKLCNGSSV ENPNPKVLKS CEMVNFKNGI ENGQEEDSSN KKRSPVSNNE
361 EGMLSFTSVL PCDSNHSDLE ASVAKEAESN RVVVEPEKKP RKRGRKPANG REEPLNHVEA
421 ERQRREKLNQ RFYSLRAVVP NVSKMDKASL LGDAISYISE LKSKLQKAES DKEELQKQID
481 VMNKEAGNAK SSVKDRKCLN QESSVLIEME VDVKIIGWDA MIRIQCSKRN HPGAKFMEAL
541 KELDLEVNHA SLSVVNDLMI QQATVKMGNQ FFTQDQLKVA LTEKVGECP
//