LOCUS AEE83920.2 1828 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tRNA/rRNA methyltransferase (SpoU)
family protein protein.
ACCESSION CP002687-3001
PROTEIN_ID AEE83920.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G17610"
/gene_synonym="DL4840C"
/gene_synonym="FCAALL.71"
/inference="Similar to RNA sequence,
EST:INSD:BP797387.1,INSD:EH914757.1,INSD:EL967697.1,
INSD:ES027537.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK230224.1"
/note="tRNA/rRNA methyltransferase (SpoU) family protein;
FUNCTIONS IN: RNA binding, RNA methyltransferase activity;
INVOLVED IN: RNA processing; LOCATED IN: endomembrane
system; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537);
Has 6630 Blast hits to 6614 proteins in 1865 species:
Archae - 7; Bacteria - 4787; Metazoa - 103; Fungi - 50;
Plants - 109; Viruses - 0; Other Eukaryotes - 1574
(source: NCBI BLink)."
/db_xref="TAIR:AT4G17610"
/db_xref="Araport:AT4G17610"
intron_pos 53:0 (1/34)
intron_pos 84:1 (2/34)
intron_pos 120:0 (3/34)
intron_pos 278:2 (4/34)
intron_pos 349:0 (5/34)
intron_pos 449:0 (6/34)
intron_pos 503:1 (7/34)
intron_pos 549:1 (8/34)
intron_pos 576:2 (9/34)
intron_pos 671:1 (10/34)
intron_pos 709:1 (11/34)
intron_pos 791:0 (12/34)
intron_pos 874:0 (13/34)
intron_pos 926:0 (14/34)
intron_pos 973:0 (15/34)
intron_pos 1053:0 (16/34)
intron_pos 1094:2 (17/34)
intron_pos 1134:0 (18/34)
intron_pos 1188:0 (19/34)
intron_pos 1237:1 (20/34)
intron_pos 1271:0 (21/34)
intron_pos 1325:0 (22/34)
intron_pos 1341:0 (23/34)
intron_pos 1385:0 (24/34)
intron_pos 1410:0 (25/34)
intron_pos 1427:0 (26/34)
intron_pos 1476:0 (27/34)
intron_pos 1519:2 (28/34)
intron_pos 1549:0 (29/34)
intron_pos 1569:0 (30/34)
intron_pos 1649:1 (31/34)
intron_pos 1700:0 (32/34)
intron_pos 1723:2 (33/34)
intron_pos 1776:0 (34/34)
BEGIN
1 MGSSVITSLS LSFKQVPPAA IPAFLDCVLS STGVSPSTLF ESLIEQFPFR LEDTVNGDKR
61 FDSDDCNHIA SLVAGLCHLL KNFGFVAADN HNALQLFVWR VFIPLMKMVR AYDLDMLNKI
121 VESFFDVVIE TNVLDMLGVS LVPFLLRSVG FSMGMRQHEE SDFIKWGDLC LRDSLNTIDM
181 DENYIAQLSG SFPIPLSCHL LNLILNAAFQ SHQAAPKVES FAAGMLWDLC NTTERLLSQS
241 VEHRSCAVSF LLPAIFKAFS SQSSLKISHQ GNLFILSRNG FIKRIWECCK KLFSVGSIER
301 RDAYSVLSLC LSSGSWTDGT ESFVSEKDAV QFDLRSEQEF WDEIKIGLVV DESLVRKQSL
361 HILKSVLSII EVSETISEKK PEGNSVNRSM TRKETWAEKE AKSLGVGELY GSVDSGLTSQ
421 QGWQAFLLLY EMLEEYGTHL VEAAWSNQID LLIKSSLRYD GTLKSDCNNS HHGHMETPDE
481 EAKIFNWLEV LWNRGFRHDN PLVRCTVMES FFGIEWRRYK TCTQSMSQTF VLGPFIEGLN
541 DPTHHKDFGL KGIYTSRTIE GAAQYVSAYT SCLNPRNRVG FLINLASLAK KQSFCRAGFM
601 ALVQCIVSTA YVVGGYGDKE MGHLEDKFSG TAQESSCGHL SQDDMTHILD VLKFVAESSR
661 QHFNHKYRIR VYQKVLETAA SVVNPCNVPL GTLLQFVSAI PREFTDHDGL LRKMMLEWLQ
721 GCNRKTSNSL CTDGTRLLAS LYEYLKGFTS DNVESFDDED LEAWDSQTKR WARVFFLMIN
781 KEEHLTDIIM FVQNNGLSFF QEKNHLKRAP AKFLIFILSM LLELQNMQDG ISELSSSVKS
841 KSGIGSDEQT GKQIVVDASS IKKKFAVVLL SILKELIPFA DSSCSIFWSH TTVENGALPG
901 SVIGKLGGPS QRRLSVPTTT AVLEAVLSVK TIGLISSYCA QFTSGVGELK LALAFFWKFT
961 QHTISSQICN SEAAAEIYLA AFEALASVLN AFVSLCSAGA FNLLENDSTL LSMVDGEFWL
1021 QVSVPAFVRN INHLLTAGVL VRSRRAVLLS WKWLCVESLL SVMHILDARR IPEDRKSFFS
1081 DDTVKSIFQD IVESLENAGE GSALPMLKSV RLALGILASG KSSLDGFSGV DTQTMWQLVK
1141 SCWILHISCK KRRVAPIAAL LSSVLHSSLF SNKDMHITED EHGPLKWFVE KVLEEGQKSP
1201 RTIRLAALHL SGLWLMYPRT IKYYIKELRL LTLYGSVAFD EDFEAELSDN NDARTEVSLL
1261 AKSPDPELTE LFINTELYAR VSVAGLFQKL ANLAYMVEPA SQNQDCQDAL VAGKLFLLEL
1321 LDAAVHDKDL AKELYKKYSA IHRRKIRAWQ MICIMSRFVC NDIVGQVMDS VHICLHVSLQ
1381 EQTERNNLPA VRQYLETFAI NIYLKFPALV KEQLVPILKN YDSKAQQALS SYVFVAANVI
1441 LHAEKIAQQT HLRELLPPIL PLLTSHHHSL RGFAQLLVHR VLFRLFPPVE STSSHTISLE
1501 KLSFENLKSY LDKNPDCSRL RASMEGFLDA YDPSTSATPA GVFVNRVEES EFECVPTCLM
1561 DNVLSFLNDV REDLRASMAK DVVTIKNEGF KIDEEPKRRL IMSTTDEERL SEPSSLDFQR
1621 KITLSKHEKQ DASSTSVLRN GETYKRLFEM EKEDELVTQL LRSRSMEVER LKSGRQSLIL
1681 VASLVDRIPN LAGLARTCEV FKASSLAVAD ASIIHDKQFQ LISVTAEKWV PIMEVPVNSL
1741 KLFLEKKKRE GFSILGLEQT ANSVSLDKYQ FPKKTVLVLG REKEGIPVDI IHILDACIEI
1801 PQLGVVRSLN VHVSGAIALW EYTRQQRI
//