LOCUS AEE83907.1 202 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB GTPase homolog 1C protein.
ACCESSION CP002687-2987
PROTEIN_ID AEE83907.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RAB1C"
/locus_tag="AT4G17530"
/gene_synonym="ATRAB1C"
/gene_synonym="ATRABD2C"
/gene_synonym="DL4800C"
/gene_synonym="FCAALL.87"
/gene_synonym="RAB GTPase homolog 1C"
/inference="Similar to RNA sequence,
EST:INSD:BP815055.2,INSD:BP595232.1,INSD:AI993777.1,
INSD:ES051468.1,INSD:DR277814.1,INSD:AV801556.1,
INSD:CK118553.1,INSD:EL193616.1,INSD:EL161945.1,
INSD:BP802115.1,INSD:BP802997.1,INSD:ES210864.1,
INSD:ES009345.1,INSD:BP589981.1,INSD:EH906799.1,
INSD:BE528025.1,INSD:BP807696.1,INSD:EH890170.1,
INSD:BE845092.1,INSD:EL199184.1,INSD:AV820826.1,
INSD:AV824866.1,INSD:DR381136.1,INSD:DR344759.1,
INSD:EL329002.1,INSD:EL031319.1,INSD:BE038537.1,
INSD:DR344741.1,INSD:DR344756.1,INSD:AV554694.1,
INSD:DR344750.1,INSD:EL222005.1,INSD:EL257750.1,
INSD:BP638283.1,INSD:DR344745.1,INSD:EH927589.1,
INSD:EG468418.1,INSD:DR277819.1,INSD:ES074807.1,
INSD:DR344743.1,INSD:BP591210.1,INSD:ES143629.1,
INSD:BE522184.1,INSD:ES095337.1,INSD:ES057253.1,
INSD:BP615363.1,INSD:DR277816.1,INSD:DR344740.1,
INSD:CB261486.1,INSD:BP594970.1,INSD:EL188848.1,
INSD:BP574396.1,INSD:AV544985.1,INSD:BP810287.1,
INSD:DR344738.1,INSD:BP633774.1,INSD:DR344754.1,
INSD:EL084973.1,INSD:BP856508.1,INSD:DR344752.1,
INSD:DR253136.1,INSD:T21230.1,INSD:CK121907.1,
INSD:DR277818.1,INSD:EL088406.1,INSD:CB262024.1,
INSD:DR370533.1,INSD:ES100629.1,INSD:Z26192.1,
INSD:AV538991.1,INSD:EL334408.1,INSD:EH912186.1,
INSD:DR344749.1,INSD:CB263771.1,INSD:BE529463.1,
INSD:BP582167.1,INSD:DR344747.1,INSD:AV832352.1,
INSD:EL240052.1,INSD:EH971852.1,INSD:CD532236.1,
INSD:DR344753.1,INSD:BP563493.1,INSD:BP865867.1,
INSD:DR344748.1,INSD:EL035651.1,INSD:DR344744.1,
INSD:DR344742.1,INSD:DR344755.1,INSD:ES041583.1,
INSD:DR344739.1,INSD:EH800647.1,INSD:BP641979.1,
INSD:AV796841.1,INSD:EL114927.1,INSD:AV560032.1,
INSD:BP862828.1,INSD:F15150.1,INSD:AV554203.1,
INSD:EL079454.1,INSD:DR344746.1,INSD:AV539452.1,
INSD:AV551333.1,INSD:EG468407.1,INSD:DR344757.1,
INSD:BP579937.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY052204.1,INSD:AF127134.1,INSD:BX826393.1,
INSD:AK227290.1,INSD:AY060495.1"
/note="RAB GTPase homolog 1C (RAB1C); FUNCTIONS IN: GTP
binding; INVOLVED IN: protein transport, small GTPase
mediated signal transduction; LOCATED IN: plasma membrane,
vacuole, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; CONTAINS InterPro
DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small
GTP-binding protein (InterPro:IPR005225), Small GTPase
(InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small
GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis
thaliana protein match is: RAB GTPase homolog 1A
(TAIR:AT5G47200.1); Has 29496 Blast hits to 29428 proteins
in 784 species: Archae - 23; Bacteria - 169; Metazoa -
15486; Fungi - 4134; Plants - 3462; Viruses - 20; Other
Eukaryotes - 6202 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17530"
/db_xref="Araport:AT4G17530"
intron_pos 5:2 (1/7)
intron_pos 30:0 (2/7)
intron_pos 46:0 (3/7)
intron_pos 62:0 (4/7)
intron_pos 86:0 (5/7)
intron_pos 138:0 (6/7)
intron_pos 172:2 (7/7)
BEGIN
1 MNPEYDYLFK LLLIGDSGVG KSCLLLRFAD DSYLDSYIST IGVDFKIRTV EQDGKTIKLQ
61 IWDTAGQERF RTITSSYYRG AHGIIVTYDV TDLESFNNVK QWLNEIDRYA SENVNKLLVG
121 NKCDLTSQKV VSTETAKAFA DELGIPFLET SAKNATNVEE AFMAMTAAIK TRMASQPAGG
181 SKPPTVQIRG QPVNQQSGCC SS
//