LOCUS AEE83894.1 282 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeobox-leucine zipper protein 4
(HB-4) / HD-ZIP protein protein.
ACCESSION CP002687-2966
PROTEIN_ID AEE83894.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="HAT1"
/locus_tag="AT4G17460"
/gene_synonym="DL4765W"
/gene_synonym="FCAALL.65"
/gene_synonym="HOMEOBOX PROTEIN"
/gene_synonym="JAB"
/gene_synonym="JAIBA"
/inference="Similar to RNA sequence,
EST:INSD:DR238630.1,INSD:CB253675.1,INSD:DR238623.1,
INSD:DR375285.1,INSD:DR238640.1,INSD:DR238638.1,
INSD:AV561071.1,INSD:BP636261.1,INSD:ES043592.1,
INSD:EL287433.1,INSD:T43429.1,INSD:BP862086.1,
INSD:DR238634.1,INSD:DR238621.1,INSD:ES068276.1,
INSD:DR238622.1,INSD:EL316643.1,INSD:DR238637.1,
INSD:DR238636.1,INSD:AV565231.1,INSD:BP588711.1,
INSD:DR238625.1,INSD:DR238643.1,INSD:DR238629.1,
INSD:ES003800.1,INSD:ES191874.1,INSD:CB252827.1,
INSD:DR238628.1,INSD:DR238642.1,INSD:AA712975.1,
INSD:ES127025.1,INSD:AU236952.1,INSD:DR238641.1,
INSD:DR238624.1,INSD:ES151764.1,INSD:CF773864.1,
INSD:AV551157.1,INSD:BP636378.1,INSD:DR238633.1,
INSD:ES209685.1,INSD:DR751590.1,INSD:DR238639.1,
INSD:DR238632.1,INSD:BP861234.1,INSD:AV544814.1,
INSD:AV550451.1,INSD:EL234490.1,INSD:AV553327.1,
INSD:AV562115.1,INSD:EG508589.1,INSD:BP843064.1,
INSD:DR238635.1,INSD:DR238627.1,INSD:BP587831.1,
INSD:DR238626.1,INSD:BP860552.1"
/inference="Similar to RNA sequence,
mRNA:INSD:U09332.1,INSD:BT005756.1,INSD:BT006112.1,
INSD:AK228587.1,INSD:AY087322.1,INSD:AJ441252.1"
/note="HAT1; FUNCTIONS IN: DNA binding, sequence-specific
DNA binding transcription factor activity; INVOLVED IN:
regulation of transcription, DNA-dependent, transcription,
regulation of transcription; LOCATED IN: nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: HD-ZIP protein,
N-terminal (InterPro:IPR006712), Helix-turn-helix motif,
lambda-like repressor (InterPro:IPR000047), Homeobox
(InterPro:IPR001356), Homeobox, conserved site
(InterPro:IPR017970), Homeodomain-like
(InterPro:IPR009057), Leucine zipper, homeobox-associated
(InterPro:IPR003106), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: Homeobox-leucine zipper protein 4 (HB-4) /
HD-ZIP protein (TAIR:AT5G47370.1); Has 7491 Blast hits to
7459 proteins in 526 species: Archae - 0; Bacteria - 0;
Metazoa - 5185; Fungi - 268; Plants - 1911; Viruses - 4;
Other Eukaryotes - 123 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17460"
/db_xref="Araport:AT4G17460"
intron_pos 50:1 (1/3)
intron_pos 160:0 (2/3)
intron_pos 186:2 (3/3)
BEGIN
1 MMMGKEDLGL SLSLGFAQNH PLQLNLKPTS SPMSNLQMFP WNQTLVSSSD QQKQQFLRKI
61 DVNSLPTTVD LEEETGVSSP NSTISSTVSG KRRSTEREGT SGGGCGDDLD ITLDRSSSRG
121 TSDEEEDYGG ETCRKKLRLS KDQSAVLEDT FKEHNTLNPK QKLALAKKLG LTARQVEVWF
181 QNRRARTKLK QTEVDCEYLK RCVEKLTEEN RRLEKEAAEL RALKLSPRLY GQMSPPTTLL
241 MCPSCERVAG PSSSNHNQRS VSLSPWLQMA HGSTFDVMRP RS
//