LOCUS AEE83889.1 273 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tryptophan RNA-binding attenuator
protein-like protein protein.
ACCESSION CP002687-2958
PROTEIN_ID AEE83889.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G17420"
/gene_synonym="DL4745C"
/gene_synonym="FCAALL.389"
/inference="Similar to RNA sequence,
EST:INSD:DR200515.1,INSD:EL066428.1,INSD:EL067593.1,
INSD:BP814899.1,INSD:DR200518.1,INSD:ES130127.1,
INSD:AU236607.1,INSD:DR200513.1,INSD:ES195915.1,
INSD:BP855630.1,INSD:DR200511.1,INSD:DR200510.1,
INSD:DR200508.1,INSD:DR200514.1,INSD:DR200507.1,
INSD:DR200509.1,INSD:EL978526.1,INSD:BP820378.1,
INSD:BP867987.1,INSD:EH989906.1,INSD:DR200512.1,
INSD:EH806959.1,INSD:EL315224.1,INSD:DR200517.1"
/note="Tryptophan RNA-binding attenuator protein-like;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF124 (InterPro:IPR002838),
Tryptophan RNA-binding attenuator protein-like
(InterPro:IPR016031); BEST Arabidopsis thaliana protein
match is: Tryptophan RNA-binding attenuator protein-like
(TAIR:AT5G47420.1); Has 844 Blast hits to 844 proteins in
391 species: Archae - 83; Bacteria - 631; Metazoa - 0;
Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 72
(source: NCBI BLink)."
/db_xref="TAIR:AT4G17420"
/db_xref="Araport:AT4G17420"
intron_pos 17:0 (1/11)
intron_pos 37:0 (2/11)
intron_pos 50:1 (3/11)
intron_pos 110:0 (4/11)
intron_pos 123:0 (5/11)
intron_pos 155:0 (6/11)
intron_pos 165:1 (7/11)
intron_pos 208:0 (8/11)
intron_pos 238:2 (9/11)
intron_pos 253:0 (10/11)
intron_pos 258:1 (11/11)
BEGIN
1 MAAPFFSTPF QPYVYQSQED TITPFQILGG EAQVVQIMLK PQEKVIAKPG SMCYMSGSIE
61 MDNTYTPEQE VGVVQWILGK SVSSIVLRNT GQNDGFVGIA APSLARILPL DLAMFGGDIL
121 CQPDAFLCSV HDVKVVNTVY QRHRARNIAA AGAEGLAFII AGGSVVQKNL EVGEVLTIDV
181 SCIAALTPSI NFQIKYNAAP VRRAVFGGDN VVTATLTGPG IVFIQSLPFH RLSQRIARSV
241 TSPNMRENPR LLRCTHISVA GMFIVNRYLK SFI
//