LOCUS AEE83887.1 285 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tryptophan RNA-binding attenuator
protein-like protein protein.
ACCESSION CP002687-2960
PROTEIN_ID AEE83887.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G17420"
/gene_synonym="DL4745C"
/gene_synonym="FCAALL.389"
/inference="Similar to RNA sequence,
EST:INSD:EL066428.1,INSD:AU236607.1,INSD:ES130127.1,
INSD:DR200513.1,INSD:BP590483.1,INSD:ES195915.1,
INSD:DR377135.1,INSD:DR200508.1,INSD:DR200514.1,
INSD:EL978526.1,INSD:DR200509.1,INSD:BP867987.1,
INSD:EH989906.1,INSD:EH806959.1,INSD:DR200512.1,
INSD:DR200515.1,INSD:EL067593.1,INSD:BP814899.1,
INSD:DR200518.1,INSD:BP855630.1,INSD:DR200511.1,
INSD:DR200510.1,INSD:BP642497.1,INSD:DR200507.1,
INSD:AU227562.1,INSD:BP820378.1,INSD:EL315224.1,
INSD:DR200517.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY086638.1,INSD:BT004256.1,INSD:BT005622.1"
/note="Tryptophan RNA-binding attenuator protein-like;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF124 (InterPro:IPR002838), Tryptophan RNA-binding
attenuator protein-like (InterPro:IPR016031); BEST
Arabidopsis thaliana protein match is: Tryptophan
RNA-binding attenuator protein-like (TAIR:AT5G47420.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT4G17420"
/db_xref="Araport:AT4G17420"
intron_pos 17:0 (1/9)
intron_pos 37:0 (2/9)
intron_pos 50:1 (3/9)
intron_pos 110:0 (4/9)
intron_pos 123:0 (5/9)
intron_pos 155:0 (6/9)
intron_pos 175:1 (7/9)
intron_pos 218:0 (8/9)
intron_pos 248:2 (9/9)
BEGIN
1 MAAPFFSTPF QPYVYQSQED TITPFQILGG EAQVVQIMLK PQEKVIAKPG SMCYMSGSIE
61 MDNTYTPEQE VGVVQWILGK SVSSIVLRNT GQNDGFVGIA APSLARILPL DLAMFGGDIL
121 CQPDAFLCSV HDVKVVNTVY QRHRARNIAA AGAEGVLRQR LSGQGLAFII AGGSVVQKNL
181 EVGEVLTIDV SCIAALTPSI NFQIKYNAAP VRRAVFGGDN VVTATLTGPG IVFIQSLPFH
241 RLSQRIARSV TSPNMRENPR LLVQIGLFIF LAYVVIVSSL ILTEM
//