LOCUS AEE83884.1 826 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DWNN domain, a CCHC-type zinc finger protein.
ACCESSION CP002687-2955
PROTEIN_ID AEE83884.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /locus_tag="AT4G17410"
/gene_synonym="DL4740W"
/gene_synonym="FCAALL.426"
/inference="Similar to RNA sequence,
EST:INSD:ES100779.1,INSD:EH969754.1,INSD:EL327612.1,
INSD:AV801484.1,INSD:EL248333.1,INSD:ES112548.1,
INSD:AV557788.1,INSD:EH952024.1,INSD:ES207428.1,
INSD:EH824514.1,INSD:EH816205.1,INSD:EL019287.1,
INSD:AV828459.1,INSD:EL078934.1,INSD:AV823689.1,
INSD:EL041300.1,INSD:EL315583.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK226942.1,INSD:BX828752.1,INSD:BX828536.1,
INSD:AK226408.1"
/note="DWNN domain, a CCHC-type zinc finger; FUNCTIONS IN:
zinc ion binding; INVOLVED IN: biological_process unknown;
LOCATED IN: nucleus; EXPRESSED IN: sperm cell, cultured
cell; CONTAINS InterPro DOMAIN/s: DWNN domain
(InterPro:IPR014891); BEST Arabidopsis thaliana protein
match is: DWNN domain, a CCHC-type zinc finger
(TAIR:AT5G47430.1); Has 9457 Blast hits to 6950 proteins
in 351 species: Archae - 2; Bacteria - 103; Metazoa -
5659; Fungi - 1428; Plants - 824; Viruses - 57; Other
Eukaryotes - 1384 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17410"
/db_xref="Araport:AT4G17410"
intron_pos 56:1 (1/14)
intron_pos 88:2 (2/14)
intron_pos 113:0 (3/14)
intron_pos 165:2 (4/14)
intron_pos 191:1 (5/14)
intron_pos 210:1 (6/14)
intron_pos 262:2 (7/14)
intron_pos 313:1 (8/14)
intron_pos 368:1 (9/14)
intron_pos 469:1 (10/14)
intron_pos 482:1 (11/14)
intron_pos 572:2 (12/14)
intron_pos 613:2 (13/14)
intron_pos 641:0 (14/14)
BEGIN
1 MAIYYKFKSA RDYDTISMDG PFITVGLLKE KIYETKHLGS GKDLDIVISN AQTNEEYLDE
61 AMLIPKNTSV LIRRVPGRPR IRIITREEPR VEDKVENVQA DMNNVITADA SPVEDEFDEF
121 GNDLYSIPDA PAVHSNNLCH DSAPADDEET KLKALIDTPA LDWHQQGADS FGPGRGYGRG
181 MAGRMGGRGF GMERTTPPPG YVCHRCNVSG HFIQHCSTNG NPNFDVKRVK PPTGIPKSML
241 MATPNGSYSL PSGAVAVLKP NEDAFEKEME GLTSTTRSVG EFPPELKCPL CKEVMRDAAL
301 ASKCCLKSYC DKCIRDHIIA KSMCVCGATH VLADDLLPNK TLRDTINRIL ESGNSSAENA
361 GSMCQVQDME SVRCPPPKAL SPTTSAASGG EKKPAPSNNN ETSTLKPSIE IAEITSAWAS
421 AEIVKVEKPV DASANIQGSS NGKEAAVSQL NTQPPKEEMP QQVASGEQGK RKKKKPRMSG
481 TDLAGPDYMM PMGPGPGNQY FNGFQPGFNG VQHGFNGVQP GFNGFHHGFN GFPGPFPGAM
541 PPFVGYGFGG VIHPDPFAAQ GFGFPNIPPP YRDLAEMGNR MNLQHPIMGR EEFEAKKTEM
601 KRKRENEIRR SEGGNVVRDS EKSRIMNNSA VTSSPVKPKS RQGPPPPISS DYDRRRRSDR
661 SSPERQSSRR FTSPPRSSSR KSERDRHHDL DSEHDRRRDR PRETDRKHRK RSEKSSSDPT
721 VEIDDNNKSN VFTRISFPEE SSGKQRKTSK SSPAPPESSV APVSSGRRHH SRREREMVEY
781 DSSDDEDRHF KRKPSRYKRS PSVAPSDAGD EHFRHSKRSK GERARA
//