LOCUS AEE83874.1 567 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Class II aminoacyl-tRNA and biotin
synthetases superfamily protein protein.
ACCESSION CP002687-2921
PROTEIN_ID AEE83874.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="NS1"
/locus_tag="AT4G17300"
/gene_synonym="ATNS1"
/gene_synonym="DL4685W"
/gene_synonym="FCAALL.396"
/gene_synonym="OVA8"
/gene_synonym="ovule abortion 8"
/inference="Similar to RNA sequence,
EST:INSD:ES020373.1,INSD:EG501221.1,INSD:EG475832.1,
INSD:CB074311.1,INSD:EL284926.1,INSD:EG501229.1,
INSD:ES112199.1,INSD:EH872166.1,INSD:BP562297.1,
INSD:EL240751.1,INSD:EH878869.1,INSD:AI994358.1,
INSD:EH873632.1,INSD:EL157533.1,INSD:AV812325.1,
INSD:EH832956.1,INSD:EL236679.1,INSD:N97006.1,
INSD:EG501263.1,INSD:EH805051.1,INSD:EH853249.1,
INSD:EH952172.1,INSD:ES042904.1,INSD:EH992337.1,
INSD:EL287862.1,INSD:EG501218.1,INSD:EG475848.1,
INSD:EG501230.1,INSD:EG474729.1,INSD:EH965855.1,
INSD:EH885340.1,INSD:EL119436.1,INSD:EL191557.1,
INSD:EH834106.1,INSD:ES057571.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AJ222644.1,INSD:AY078967.1"
/note="NS1; FUNCTIONS IN: asparagine-tRNA ligase activity;
INVOLVED IN: asparaginyl-tRNA aminoacylation, ovule
development; LOCATED IN: mitochondrion, chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid
binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365),
Asparaginyl-tRNA synthetase, class IIb
(InterPro:IPR004522), Aminoacyl-tRNA synthetase, class II,
conserved domain (InterPro:IPR006195),
Aspartyl/Asparaginyl-tRNA synthetase, class IIb
(InterPro:IPR002312), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II
(D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase,
class II (D/K/N)-like (InterPro:IPR018150); BEST
Arabidopsis thaliana protein match is: Class II
aminoacyl-tRNA and biotin synthetases superfamily protein
(TAIR:AT1G70980.1); Has 19374 Blast hits to 17086 proteins
in 2835 species: Archae - 447; Bacteria - 14373; Metazoa -
505; Fungi - 670; Plants - 294; Viruses - 0; Other
Eukaryotes - 3085 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17300"
/db_xref="Araport:AT4G17300"
intron_pos 132:0 (1/13)
intron_pos 155:0 (2/13)
intron_pos 192:0 (3/13)
intron_pos 227:0 (4/13)
intron_pos 273:0 (5/13)
intron_pos 300:0 (6/13)
intron_pos 326:0 (7/13)
intron_pos 349:0 (8/13)
intron_pos 374:0 (9/13)
intron_pos 402:0 (10/13)
intron_pos 431:0 (11/13)
intron_pos 488:0 (12/13)
intron_pos 530:1 (13/13)
BEGIN
1 MAATFLPATS LRLTQNSTLR FLSFFTISNP SYSLFRPLRR RVLPPFDAFP ANSRRRCFCT
61 AVSESLGSGD GNKVESYEKR FGSKVGEFRK KLRIAEVKGG ADEGLSRVGQ SLNIMGWVRT
121 LRSQSSVTFI EINDGSCLSN LQCVMTSDAE GYDQVESGSI LTGASVSVQG TIVASQGTKQ
181 KVELKVEKII VVGECDSSYP IQKKRVSREF LRTKAHLRPR TNTFGAVARV RNTLAYATHK
241 FFQESGFVWV ASPIITASDC EGAGEQFCVT TLIPSSHENT DTSIDAIPKT KGGLIDWSQD
301 FFGKPAFLTV SGQLNGETYA TALSDVYTFG PTFRAENSNT SRHLAEFWMI EPELAFADLD
361 DDMACATAYL QYVVKYVLDN CKEDMEFFDT WIEKGIIRRL SDVAEKEFLQ LGYTDAIEIL
421 LKANKKFDFP VKWGLDLQSE HERYITEEAF GGRPVIIRDY PKEIKAFYMR ENDDGKTVAA
481 MDMLVPRIGE LIGGSQREER LEVLEARLDE LKLNKESYWW YLDLRRYGSV PHAGFGLGFE
541 RLVQFVTGID NIRDVIPFPR TPASAEF
//