LOCUS AEE83865.1 529 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SCARECROW-like 13 protein.
ACCESSION CP002687-2909
PROTEIN_ID AEE83865.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="SCL13"
/locus_tag="AT4G17230"
/gene_synonym="DL4650C"
/gene_synonym="FCAALL.225"
/gene_synonym="SCARECROW-like 13"
/inference="Similar to RNA sequence,
EST:INSD:AV525257.1,INSD:BX836326.1,INSD:BP808454.1,
INSD:BX836288.1,INSD:BP602994.1,INSD:BP804232.1,
INSD:EL179452.1,INSD:AV820139.1,INSD:BP599829.1,
INSD:AV789098.1,INSD:CB074907.1,INSD:EG484120.1,
INSD:BP668160.1,INSD:BP853330.1,INSD:BP811527.1,
INSD:BP645444.1,INSD:CB260629.1,INSD:BX839062.1,
INSD:BP639102.1,INSD:BP848276.1,INSD:F15454.1,
INSD:BP661260.1,INSD:BP619877.1,INSD:EG523213.1,
INSD:AV551892.1,INSD:BP663454.1,INSD:BP629240.1,
INSD:DR319635.1,INSD:BP618542.1,INSD:BP608256.1,
INSD:AV527822.1,INSD:AV521144.1,INSD:BP612006.1,
INSD:BP853329.1,INSD:AV831883.1,INSD:BP632292.1,
INSD:BP615565.1,INSD:BP821592.1,INSD:BP638474.1,
INSD:BP615617.1,INSD:EH864712.1,INSD:BP640515.1,
INSD:R29917.1,INSD:BP852855.1,INSD:EL032092.1,
INSD:BP665796.1,INSD:AV818076.1,INSD:AV518447.1,
INSD:DR373874.1,INSD:EH993108.1,INSD:BX835412.1,
INSD:AV536584.1,INSD:EG523212.1,INSD:EH989550.1,
INSD:AV791568.1,INSD:BP818489.1,INSD:BP637407.1,
INSD:BP809806.1,INSD:BP815104.1,INSD:EH921405.1,
INSD:EG493635.1,INSD:AV825567.1,INSD:BP811744.1,
INSD:T76665.1,INSD:BP819228.1,INSD:EL160326.1,
INSD:BP652153.1,INSD:ES200103.1,INSD:AV540416.1,
INSD:BP812602.1,INSD:BP581141.1,INSD:DR355368.1,
INSD:BP784320.1,INSD:BP814248.1,INSD:ES037041.1,
INSD:EL090396.1,INSD:AA720344.1,INSD:BP819622.1,
INSD:CF651689.1,INSD:BP655087.1,INSD:N37425.1,
INSD:BP613760.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX827672.1,INSD:AF419570.1,INSD:BT001076.1,
INSD:AK226549.1,INSD:AF036308.1,INSD:BX826427.1"
/note="SCARECROW-like 13 (SCL13); CONTAINS InterPro
DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202);
BEST Arabidopsis thaliana protein match is: scarecrow-like
5 (TAIR:AT1G50600.1); Has 2512 Blast hits to 2467 proteins
in 302 species: Archae - 0; Bacteria - 4; Metazoa - 0;
Fungi - 0; Plants - 2508; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17230"
/db_xref="Araport:AT4G17230"
BEGIN
1 MQTSQKHHSA AGLHMLYPQV YCSPQFQAKD NKGFSDIPSK ENFFTLESST ASGSLPSYDS
61 PSVSITSGRS PFSPQGSQSC ISDLHHSPDN VYGSPLSGVS SLAYDEAGVK SKIRELEVSL
121 LSGDTKVEEF SGFSPAAGKS WNWDELLALT PQLDLKEVLV EAARAVADGD FATAYGFLDV
181 LEQMVSVSGS PIQRLGTYMA EGLRARLEGS GSNIYKSLKC NEPTGRELMS YMSVLYEICP
241 YWKFAYTTAN VEILEAIAGE TRVHIIDFQI AQGSQYMFLI QELAKRPGGP PLLRVTGVDD
301 SQSTYARGGG LSLVGERLAT LAQSCGVPFE FHDAIMSGCK VQREHLGLEP GFAVVVNFPY
361 VLHHMPDESV SVENHRDRLL HLIKSLSPKL VTLVEQESNT NTSPFLSRFV ETLDYYTAMF
421 ESIDAARPRD DKQRISAEQH CVARDIVNMI ACEESERVER HEVLGIWRVR MMMAGFTGWP
481 VSTSAAFAAS EMLKAYDKNY KLGGHEGALY LFWKRRPMAT CSVWKPNPN
//