LOCUS AEE83857.1 211 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB GTPase homolog B1C protein.
ACCESSION CP002687-2899
PROTEIN_ID AEE83857.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 18585056)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 18585056)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 18585056)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
protein /gene="RABB1C"
/locus_tag="AT4G17170"
/gene_synonym="ARABIDOPSIS RAB GTPASE HOMOLOG B1B"
/gene_synonym="AT-RAB2"
/gene_synonym="ATRAB-B1B"
/gene_synonym="ATRAB2A"
/gene_synonym="ATRABB1C"
/gene_synonym="DL4620C"
/gene_synonym="FCAALL.365"
/gene_synonym="RAB GTPASE HOMOLOG B1B"
/gene_synonym="RAB GTPase homolog B1C"
/gene_synonym="RAB-B1B"
/gene_synonym="RAB2A"
/inference="Similar to RNA sequence,
EST:INSD:AV816738.1,INSD:EL988236.1,INSD:EL285584.1,
INSD:BP593629.1,INSD:EL182004.1,INSD:EL249515.1,
INSD:BP650928.1,INSD:EH954167.1,INSD:AV785651.1,
INSD:BP600129.1,INSD:BP629586.1,INSD:DR246908.1,
INSD:BP561070.1,INSD:BP805923.1,INSD:CD531391.1,
INSD:BP638764.1,INSD:BP593275.1,INSD:BP585664.1,
INSD:N38166.1,INSD:DR246914.1,INSD:BP561117.2,
INSD:BP805350.1,INSD:BP850638.1,INSD:BP606391.1,
INSD:DR246911.1,INSD:BP564264.1,INSD:CF653058.1,
INSD:N38233.1,INSD:EL141504.1,INSD:ES185861.1,
INSD:EL184509.1,INSD:BP810155.1,INSD:AV814055.1,
INSD:BP826956.1,INSD:DR246913.1,INSD:DR246904.1,
INSD:BP654829.1,INSD:AV788149.1,INSD:AV553359.1,
INSD:BP589069.1,INSD:BU635320.1,INSD:BP618098.1,
INSD:BP654993.1,INSD:EH843030.1,INSD:EL024481.1,
INSD:EG466994.1,INSD:BP830392.1,INSD:EL287009.1,
INSD:BP857743.1,INSD:BP808087.1,INSD:EL141314.1,
INSD:DR246905.1,INSD:BP602643.1,INSD:EG514100.1,
INSD:BP617522.1,INSD:EL990394.1,INSD:BP647871.1,
INSD:EL047427.1,INSD:BP599883.1,INSD:DR246912.1,
INSD:EG466993.1,INSD:BP642558.1,INSD:EH832941.1,
INSD:BP797535.1,INSD:BP565073.1,INSD:BP596242.1,
INSD:EG513968.1,INSD:EL252835.1,INSD:DR246906.1,
INSD:EL333132.1,INSD:BP620680.1,INSD:CB264672.1,
INSD:ES110915.1,INSD:EH893072.1,INSD:BP810181.1,
INSD:EH860767.1,INSD:BP663745.1,INSD:EG513951.1,
INSD:AV830963.1,INSD:EL097569.1,INSD:BP595736.1,
INSD:DR198829.1,INSD:EL292739.1,INSD:BP588892.1,
INSD:ES036374.1,INSD:BP805437.1,INSD:BP611754.1,
INSD:EL326736.1,INSD:AV800226.1,INSD:BP662521.1,
INSD:N38317.1,INSD:EL025023.1,INSD:EL264504.1,
INSD:BP614581.1,INSD:BP808677.1,INSD:BP862832.1,
INSD:BP846941.1,INSD:EL219378.1,INSD:AV784998.1,
INSD:BP810082.1,INSD:ES017272.1,INSD:BP595234.1,
INSD:T88291.1,INSD:EG513910.1,INSD:BP661601.1,
INSD:EL219078.1,INSD:EH856311.1,INSD:EL235564.1,
INSD:AV536228.1,INSD:BP573424.1,INSD:AV824324.1,
INSD:BP595888.1,INSD:BP818641.1,INSD:AI999592.1,
INSD:AV803533.1,INSD:EL051361.1,INSD:BP631977.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT006251.1,INSD:BT002513.1,INSD:Y09314.1"
/note="RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP
binding, GTPase activity; INVOLVED IN: ER to Golgi
vesicle-mediated transport, pollen sperm cell
differentiation, cell growth; LOCATED IN: plasma membrane,
vacuole, membrane; EXPRESSED IN: 26 plant structures;
EXPRESSED DURING: 16 growth stages; CONTAINS InterPro
DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small
GTP-binding protein (InterPro:IPR005225), Small GTPase
(InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small
GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis
thaliana protein match is: GTP-binding 2
(TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins
in 734 species: Archae - 17; Bacteria - 131; Metazoa -
14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other
Eukaryotes - 5796 (source: NCBI BLink)."
/db_xref="TAIR:AT4G17170"
/db_xref="Araport:AT4G17170"
intron_pos 16:1 (1/4)
intron_pos 63:0 (2/4)
intron_pos 90:2 (3/4)
intron_pos 159:0 (4/4)
BEGIN
1 MSYAYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMITI DNKPIKLQIW
61 DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW LEDARQHANA NMTIMLIGNK
121 CDLAHRRAVS TEEGEQFAKE HGLIFMEASA KTAQNVEEAF IKTAATIYKK IQDGVFDVSN
181 ESYGIKVGYG GIPGPSGGRD GSTSQGGGCC G
//